RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 LDLRAD1Q5T700 205 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 IFFO2Q5TF58 517 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 TREML1Q86YW5 311 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 RHBDD1Q8TEB9 315 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 DUSP9Q99956 384 aaKnown RBP6.47□□□□□ -1.37
SMCO3-201ENST00000316048 NIFKQ9BYG3 293 aaKnown RBP6.47□□□□□ -1.37
SMCO3-201ENST00000316048 BACH2Q9BYV9 841 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 TOR4AQ9NXH8 423 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 A0A0G2JS52 829 aa6.46□□□□□ -1.37
SMCO3-201ENST00000316048 CYP4X1Q8N118 509 aa6.46□□□□□ -1.37
SMCO3-201ENST00000316048 GPR152Q8TDT2 470 aa6.46□□□□□ -1.37
SMCO3-201ENST00000316048 PARP2Q9UGN5 583 aa6.46□□□□□ -1.37
SMCO3-201ENST00000316048 USP20Q9Y2K6 914 aa6.46□□□□□ -1.37
SMCO3-201ENST00000316048 CTSOP43234 321 aaPredicted RBP6.46□□□□□ -1.38
SMCO3-201ENST00000316048 ORC1Q13415 861 aa6.46□□□□□ -1.38
SMCO3-201ENST00000316048 ZNF280CQ8ND82 737 aa6.46□□□□□ -1.38
SMCO3-201ENST00000316048 HSH2DQ96JZ2 352 aa6.46□□□□□ -1.38
SMCO3-201ENST00000316048 DMRTB1Q96MA1 342 aa6.46□□□□□ -1.38
SMCO3-201ENST00000316048 GRIP2Q9C0E4 1043 aa6.46□□□□□ -1.38
SMCO3-201ENST00000316048 USP35Q9P2H5 1018 aa6.46□□□□□ -1.38
SMCO3-201ENST00000316048 PLCB3Q01970 1234 aa6.45□□□□□ -1.38
SMCO3-201ENST00000316048 SLC27A3Q5K4L6 730 aa6.45□□□□□ -1.38
SMCO3-201ENST00000316048 C9orf131Q5VYM1 1079 aa6.45□□□□□ -1.38
SMCO3-201ENST00000316048 NUDT16Q96DE0 195 aaKnown RBP6.45□□□□□ -1.38
SMCO3-201ENST00000316048 CITED4Q96RK1 184 aa6.45□□□□□ -1.38
SMCO3-201ENST00000316048 GGNBP2Q9H3C7 697 aa6.45□□□□□ -1.38
SMCO3-201ENST00000316048 PNMA6FA0A0J9YX94 578 aa6.44□□□□□ -1.38
SMCO3-201ENST00000316048 MZF1P28698 734 aaPredicted RBP6.44□□□□□ -1.38
SMCO3-201ENST00000316048 C7orf43Q8WVR3 580 aa6.44□□□□□ -1.38
SMCO3-201ENST00000316048 AIDAQ96BJ3 306 aa6.44□□□□□ -1.38
SMCO3-201ENST00000316048 PLA2G2EQ9NZK7 142 aa6.44□□□□□ -1.38
SMCO3-201ENST00000316048 ALKBH8Q96BT7 664 aaKnown RBP6.44□□□□□ -1.38
SMCO3-201ENST00000316048 CFHR5Q9BXR6 569 aa6.44□□□□□ -1.38
SMCO3-201ENST00000316048 POLMQ9NP87 494 aaPredicted RBP6.44□□□□□ -1.38
SMCO3-201ENST00000316048 PDE3BQ13370 1112 aa6.43□□□□□ -1.38
SMCO3-201ENST00000316048 LINC00528Q8N1L1 170 aa6.43□□□□□ -1.38
SMCO3-201ENST00000316048 RHPN1Q8TCX5 695 aa6.43□□□□□ -1.38
SMCO3-201ENST00000316048 PRPF40AO75400 957 aaKnown RBP6.43□□□□□ -1.38
SMCO3-201ENST00000316048 ENOX2Q16206 610 aaKnown RBP6.43□□□□□ -1.38
SMCO3-201ENST00000316048 V9GY48 417 aaPredicted RBP6.43□□□□□ -1.38
SMCO3-201ENST00000316048 SPINT1O43278 529 aa6.42□□□□□ -1.38
SMCO3-201ENST00000316048 ATP4AP20648 1035 aa6.42□□□□□ -1.38
SMCO3-201ENST00000316048 RNF144AP50876 292 aaPredicted RBP6.42□□□□□ -1.38
SMCO3-201ENST00000316048 HDLBPQ00341 1268 aaKnown RBP6.42□□□□□ -1.38
SMCO3-201ENST00000316048 C8orf34Q49A92 452 aa6.42□□□□□ -1.38
SMCO3-201ENST00000316048 GNASQ5JWF2 1037 aa6.42□□□□□ -1.38
SMCO3-201ENST00000316048 XPCQ01831 940 aaPredicted RBP6.41□□□□□ -1.38
SMCO3-201ENST00000316048 POU4F2Q12837 409 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 C6orf118Q5T5N4 469 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 C1orf53Q5VUE5 145 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 PRICKLE2Q7Z3G6 844 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 SUSD3Q96L08 255 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 OPLAHO14841 1288 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 MICAL2O94851 1124 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 GTF2E1P29083 439 aaPredicted RBP6.41□□□□□ -1.38
SMCO3-201ENST00000316048 TRIP4Q15650 581 aaPredicted RBP6.41□□□□□ -1.38
SMCO3-201ENST00000316048 RNF217Q8TC41 542 aa6.41□□□□□ -1.38
SMCO3-201ENST00000316048 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
SMCO3-201ENST00000316048 DMGDHQ9UI17 866 aaKnown RBP6.41□□□□□ -1.38
SMCO3-201ENST00000316048 CCDC180Q9P1Z9 1646 aa6.4□□□□□ -1.38
SMCO3-201ENST00000316048 RHOQP17081 205 aa6.4□□□□□ -1.38
SMCO3-201ENST00000316048 GPC1P35052 558 aa6.4□□□□□ -1.38
SMCO3-201ENST00000316048 DAB2P98082 770 aa6.4□□□□□ -1.38
SMCO3-201ENST00000316048 TMC4Q7Z404 712 aa6.4□□□□□ -1.38
SMCO3-201ENST00000316048 TGFBR3LH3BV60 316 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 CAPN5O15484 640 aaPredicted RBP6.4□□□□□ -1.39
SMCO3-201ENST00000316048 BMP1P13497 986 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 IDH3AP50213 366 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 PSMD2Q13200 908 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 NBPF1Q3BBV0 1214 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 USPL1Q5W0Q7 1092 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 PI16Q6UXB8 463 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 MRS2Q9HD23 443 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.39
SMCO3-201ENST00000316048 FOXD3Q9UJU5 478 aaPredicted RBP6.4□□□□□ -1.39
SMCO3-201ENST00000316048 EIF1AYO14602 144 aaKnown RBP6.39□□□□□ -1.39
SMCO3-201ENST00000316048 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
SMCO3-201ENST00000316048 USP5P45974 858 aa6.39□□□□□ -1.39
SMCO3-201ENST00000316048 ATP2B2Q01814 1243 aa6.39□□□□□ -1.39
SMCO3-201ENST00000316048 NBPF10Q6P3W6 841 aaKnown RBP6.39□□□□□ -1.39
SMCO3-201ENST00000316048 CSRNP1Q96S65 589 aa6.39□□□□□ -1.39
SMCO3-201ENST00000316048 SORBS3O60504 671 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 BMP2P12643 396 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 IRS1P35568 1242 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 TMEM87AQ8NBN3 555 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 SPATA31C2B4DYI2 1134 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 PRR20EP86478 221 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 PRR20CP86479 221 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 PRR20DP86480 221 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 PRR20BP86481 221 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 PRR20AP86496 221 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 LRRC69Q6ZNQ3 347 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 BICDL1Q6ZP65 573 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 ZDHHC3Q9NYG2 299 aa6.38□□□□□ -1.39
SMCO3-201ENST00000316048 SCAMP3O14828 347 aaKnown RBP6.37□□□□□ -1.39
SMCO3-201ENST00000316048 CTSHP09668 335 aa6.37□□□□□ -1.39
SMCO3-201ENST00000316048 ERCC5P28715 1186 aaPredicted RBP6.37□□□□□ -1.39
SMCO3-201ENST00000316048 RAD51AP2Q09MP3 1159 aa6.37□□□□□ -1.39
SMCO3-201ENST00000316048 METTL16Q86W50 562 aaKnown RBP6.37□□□□□ -1.39
SMCO3-201ENST00000316048 FIGNL2A6NMB9 653 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms