RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 USO1O60763 962 aaKnown RBP13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 TCP11L1Q9NUJ3 509 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 B4DLN1 442 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 MRPL12P52815 198 aaKnown RBP13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 SPINK5Q9NQ38 1064 aaPredicted RBP13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 NF2P35240 595 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 ZNF518AQ6AHZ1 1483 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 BMP15O95972 392 aa13.09□□□□□ -0.31
VCPIP1-201ENST00000310421 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.31
VCPIP1-201ENST00000310421 TRMT112Q9UI30 125 aaKnown RBP13.08□□□□□ -0.31
VCPIP1-201ENST00000310421 SREK1Q8WXA9 508 aaKnown RBP13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 BBXQ8WY36 941 aaPredicted RBP13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 EVI5LQ96CN4 794 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 PLVAPQ9BX97 442 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 DNAAF4Q8WXU2 420 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 MINDY4BA8MYZ0 360 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 FERMT2Q96AC1 680 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 NAA15Q9BXJ9 866 aaKnown RBP13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 CWC25Q9NXE8 425 aaPredicted RBP13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 DYDC1Q8WWB3 177 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 PABPN1LA6NDY0 278 aaKnown RBP13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 YEATS4O95619 227 aa13.08□□□□□ -0.32
VCPIP1-201ENST00000310421 DDX46Q7L014 1031 aaKnown RBP13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 KIF4AO95239 1232 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 GSDMDP57764 484 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 ZNF213O14771 459 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 BACH2Q9BYV9 841 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 TTC12Q9H892 705 aaPredicted RBP13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 TMEM57Q8N5G2 664 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 GSTTP1A0A1W2PQM5 241 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 GOLIM4O00461 696 aa13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 GTPBP4Q9BZE4 634 aaKnown RBP13.07□□□□□ -0.32
VCPIP1-201ENST00000310421 STX1AQ16623 288 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 IFI16Q16666 785 aaKnown RBP13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 NUP88Q99567 741 aaPredicted RBP13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 SHTN1A0MZ66 631 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 WASLO00401 505 aaPredicted RBP13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 PPM1EQ8WY54 764 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 UBXN4Q92575 508 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 FAM107BQ9H098 131 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 SMC1AQ14683 1233 aaKnown RBP13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 NGLY1Q96IV0 654 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 PHF8Q9UPP1 1060 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 IL16Q14005 1332 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 CTNNA2P26232 953 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 KIF18AQ8NI77 898 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 DDX11Q96FC9 970 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 CCDC102AQ96A19 550 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 EXOC5O00471 708 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 CABP5Q9NP86 173 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 MAST1Q9Y2H9 1570 aa13.06□□□□□ -0.32
VCPIP1-201ENST00000310421 CASQ1P31415 396 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 CCDC152Q4G0S7 254 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 CRNKL1Q9BZJ0 848 aaKnown RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 NUP160Q12769 1436 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 TOP1P11387 765 aaKnown RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 MFSD6Q6ZSS7 791 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 SLFN5Q08AF3 891 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 LIMCH1Q9UPQ0 1083 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 PRPF40BQ6NWY9 871 aaKnown RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 URB2Q14146 1524 aaKnown RBP13.05□□□□□ -0.32
VCPIP1-201ENST00000310421 MYD88Q99836 296 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 FAM193AP78312 1265 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 FAM177A1Q8N128 213 aaPredicted RBP13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 RPRD2Q5VT52 1461 aaKnown RBP13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 MCM10Q7L590 875 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 CNNM2Q9H8M5 875 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 DDX19AQ9NUU7 478 aaKnown RBP13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 KRT23Q9C075 422 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 TSNARE1Q96NA8 513 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
VCPIP1-201ENST00000310421 TBCAO75347 108 aaKnown RBP13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 TBC1D5Q92609 795 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 TMCO3Q6UWJ1 677 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 HOMER2Q9NSB8 354 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 ZFYP08048 801 aaPredicted RBP13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 NOS1P29475 1434 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 TNRQ92752 1358 aa13.03□□□□□ -0.32
VCPIP1-201ENST00000310421 CCDC174Q6PII3 467 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms