RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 NGLY1Q96IV0 654 aa29.2■■■□□ 2.26
SNCB-201ENST00000310112 EXOC6BQ9Y2D4 811 aa29.2■■■□□ 2.26
SNCB-201ENST00000310112 NOP58Q9Y2X3 529 aaKnown RBP29.2■■■□□ 2.26
SNCB-201ENST00000310112 CCDC9Q9Y3X0 531 aaKnown RBP29.2■■■□□ 2.26
SNCB-201ENST00000310112 DOT1LQ8TEK3 1739 aa29.2■■■□□ 2.26
SNCB-201ENST00000310112 BCL9LQ86UU0 1499 aa29.18■■■□□ 2.26
SNCB-201ENST00000310112 NUP188Q5SRE5 1749 aa29.18■■■□□ 2.26
SNCB-201ENST00000310112 A1BGP04217 495 aa29.17■■■□□ 2.26
SNCB-201ENST00000310112 AOX1Q06278 1338 aa29.17■■■□□ 2.26
SNCB-201ENST00000310112 KIF1BPQ96EK5 621 aa29.16■■■□□ 2.26
SNCB-201ENST00000310112 AFDNP55196 1824 aaKnown RBP29.16■■■□□ 2.26
SNCB-201ENST00000310112 SMARCA5O60264 1052 aaPredicted RBP29.15■■■□□ 2.26
SNCB-201ENST00000310112 SURF6O75683 361 aaKnown RBP29.15■■■□□ 2.26
SNCB-201ENST00000310112 ERC1Q8IUD2 1116 aa29.15■■■□□ 2.26
SNCB-201ENST00000310112 C8orf37Q96NL8 207 aa29.15■■■□□ 2.26
SNCB-201ENST00000310112 CDC45O75419 566 aa29.14■■■□□ 2.26
SNCB-201ENST00000310112 SEC24BO95487 1268 aa29.14■■■□□ 2.26
SNCB-201ENST00000310112 PRIM1P49642 420 aaKnown RBP29.14■■■□□ 2.26
SNCB-201ENST00000310112 DNAJC10Q8IXB1 793 aa29.14■■■□□ 2.26
SNCB-201ENST00000310112 SUCLG2Q96I99 432 aa29.14■■■□□ 2.26
SNCB-201ENST00000310112 RBM42Q9BTD8 480 aaKnown RBP29.14■■■□□ 2.26
SNCB-201ENST00000310112 SALL3Q9BXA9 1300 aa29.14■■■□□ 2.26
SNCB-201ENST00000310112 APBB1O00213 710 aa29.13■■■□□ 2.25
SNCB-201ENST00000310112 C16orf71Q8IYS4 520 aaPredicted RBP29.13■■■□□ 2.25
SNCB-201ENST00000310112 MARCH10Q8NA82 808 aaPredicted RBP29.13■■■□□ 2.25
SNCB-201ENST00000310112 PIP4K2AP48426 406 aaPredicted RBP29.13■■■□□ 2.25
SNCB-201ENST00000310112 TBC1D32Q96NH3 1257 aa29.13■■■□□ 2.25
SNCB-201ENST00000310112 STAP2Q9UGK3 403 aa29.13■■■□□ 2.25
SNCB-201ENST00000310112 CICQ96RK0 1608 aaPredicted RBP29.12■■■□□ 2.25
SNCB-201ENST00000310112 MSH5O43196 834 aa29.12■■■□□ 2.25
SNCB-201ENST00000310112 PDE1AP54750 535 aa29.12■■■□□ 2.25
SNCB-201ENST00000310112 CCDC191Q8NCU4 936 aa29.12■■■□□ 2.25
SNCB-201ENST00000310112 RHPN1Q8TCX5 695 aa29.12■■■□□ 2.25
SNCB-201ENST00000310112 GSPT1P15170 499 aaKnown RBP29.11■■■□□ 2.25
SNCB-201ENST00000310112 SYTL4Q96C24 671 aaPredicted RBP29.11■■■□□ 2.25
SNCB-201ENST00000310112 KIF6Q6ZMV9 814 aa29.1■■■□□ 2.25
SNCB-201ENST00000310112 TTLL7Q6ZT98 887 aa29.1■■■□□ 2.25
SNCB-201ENST00000310112 SMARCC1Q92922 1105 aaPredicted RBP29.1■■■□□ 2.25
SNCB-201ENST00000310112 KAZALD1Q96I82 304 aa29.1■■■□□ 2.25
SNCB-201ENST00000310112 BICC1Q9H694 974 aaKnown RBP29.1■■■□□ 2.25
SNCB-201ENST00000310112 CYP19A1P11511 503 aaPredicted RBP29.09■■■□□ 2.25
SNCB-201ENST00000310112 CWC25Q9NXE8 425 aaPredicted RBP29.09■■■□□ 2.25
SNCB-201ENST00000310112 MX1P20591 662 aa29.08■■■□□ 2.25
SNCB-201ENST00000310112 TRIM28Q13263 835 aaKnown RBP29.08■■■□□ 2.25
SNCB-201ENST00000310112 CASC1Q6TDU7 716 aa29.08■■■□□ 2.25
SNCB-201ENST00000310112 A0A087WZG4 1122 aa29.07■■■□□ 2.24
SNCB-201ENST00000310112 H7C1W4 665 aa29.07■■■□□ 2.24
SNCB-201ENST00000310112 RABL6Q3YEC7 729 aaPredicted RBP29.07■■■□□ 2.24
SNCB-201ENST00000310112 OTUD7AQ8TE49 926 aaPredicted RBP29.07■■■□□ 2.24
SNCB-201ENST00000310112 USP21Q9UK80 565 aa29.07■■■□□ 2.24
SNCB-201ENST00000310112 TJP1Q07157 1748 aa29.07■■■□□ 2.24
SNCB-201ENST00000310112 ERICH6Q7L0X2 663 aa29.06■■■□□ 2.24
SNCB-201ENST00000310112 CASP7P55210 303 aa29.05■■■□□ 2.24
SNCB-201ENST00000310112 OS9Q13438 667 aaPredicted RBP29.05■■■□□ 2.24
SNCB-201ENST00000310112 TBC1D9Q6ZT07 1266 aa29.05■■■□□ 2.24
SNCB-201ENST00000310112 KAT6BQ8WYB5 2073 aa29.05■■■□□ 2.24
SNCB-201ENST00000310112 TCIRG1Q13488 830 aa29.04■■■□□ 2.24
SNCB-201ENST00000310112 HSP90AB3PQ58FF7 597 aa29.04■■■□□ 2.24
SNCB-201ENST00000310112 ISCA1Q9BUE6 129 aa29.04■■■□□ 2.24
SNCB-201ENST00000310112 ZNF831Q5JPB2 1677 aa29.04■■■□□ 2.24
SNCB-201ENST00000310112 ATP5J2-PTCD1G3V325 749 aa29.03■■■□□ 2.24
SNCB-201ENST00000310112 IL6STP40189 918 aaPredicted RBP29.03■■■□□ 2.24
SNCB-201ENST00000310112 MFAP1P55081 439 aaKnown RBP29.03■■■□□ 2.24
SNCB-201ENST00000310112 FAM98CQ17RN3 349 aaKnown RBP29.03■■■□□ 2.24
SNCB-201ENST00000310112 SLC4A9Q96Q91 983 aa29.03■■■□□ 2.24
SNCB-201ENST00000310112 C22orf23Q9BZE7 217 aa29.03■■■□□ 2.24
SNCB-201ENST00000310112 MAP3K15Q6ZN16 1313 aa29.03■■■□□ 2.24
SNCB-201ENST00000310112 USP42Q9H9J4 1324 aaKnown RBP29.03■■■□□ 2.24
SNCB-201ENST00000310112 SDSP20132 328 aa29.02■■■□□ 2.24
SNCB-201ENST00000310112 G3BP1Q13283 466 aaKnown RBP eCLIP29.02■■■□□ 2.24
SNCB-201ENST00000310112 UBE3BQ7Z3V4 1068 aa29.02■■■□□ 2.24
SNCB-201ENST00000310112 CLASRPQ8N2M8 674 aaKnown RBP29.02■■■□□ 2.24
SNCB-201ENST00000310112 ZBTB3Q9H5J0 574 aa29.02■■■□□ 2.24
SNCB-201ENST00000310112 THSD7AQ9UPZ6 1657 aa29.02■■■□□ 2.24
SNCB-201ENST00000310112 COPRSQ9NQ92 184 aa29.01■■■□□ 2.23
SNCB-201ENST00000310112 DAXXQ9UER7 740 aaPredicted RBP29.01■■■□□ 2.23
SNCB-201ENST00000310112 TTC41PQ6P2S7 1318 aa29■■■□□ 2.23
SNCB-201ENST00000310112 ERVV-1B6SEH8 477 aa29■■■□□ 2.23
SNCB-201ENST00000310112 RBM25P49756 843 aaKnown RBP29■■■□□ 2.23
SNCB-201ENST00000310112 MEX3CQ5U5Q3 659 aaKnown RBP29■■■□□ 2.23
SNCB-201ENST00000310112 GIGYF2Q6Y7W6 1299 aaKnown RBP29■■■□□ 2.23
SNCB-201ENST00000310112 RREB1Q92766 1687 aa28.99■■■□□ 2.23
SNCB-201ENST00000310112 HSPA1LP34931 641 aa28.99■■■□□ 2.23
SNCB-201ENST00000310112 TUBGCP6Q96RT7 1819 aa28.98■■■□□ 2.23
SNCB-201ENST00000310112 BECN1Q14457 450 aa28.98■■■□□ 2.23
SNCB-201ENST00000310112 ACSBG1Q96GR2 724 aa28.98■■■□□ 2.23
SNCB-201ENST00000310112 GPATCH3Q96I76 525 aa28.98■■■□□ 2.23
SNCB-201ENST00000310112 IL1RAPL2Q9NP60 686 aa28.98■■■□□ 2.23
SNCB-201ENST00000310112 LOC102724428A0A0B4J2F2 783 aa28.97■■■□□ 2.23
SNCB-201ENST00000310112 SIK1P57059 783 aa28.97■■■□□ 2.23
SNCB-201ENST00000310112 PALLDQ8WX93 1383 aa28.96■■■□□ 2.23
SNCB-201ENST00000310112 EPHA10Q5JZY3 1008 aa28.96■■■□□ 2.23
SNCB-201ENST00000310112 BCL11AQ9H165 835 aa28.95■■■□□ 2.22
SNCB-201ENST00000310112 CCDC87Q9NVE4 849 aa28.95■■■□□ 2.22
SNCB-201ENST00000310112 ZBTB1Q9Y2K1 713 aa28.95■■■□□ 2.22
SNCB-201ENST00000310112 ERC2O15083 957 aa28.94■■■□□ 2.22
SNCB-201ENST00000310112 PCCAP05165 728 aaPredicted RBP28.94■■■□□ 2.22
SNCB-201ENST00000310112 ATP6V1AP38606 617 aa28.94■■■□□ 2.22
SNCB-201ENST00000310112 RFX5P48382 616 aaPredicted RBP28.94■■■□□ 2.22
SNCB-201ENST00000310112 PA2G4Q9UQ80 394 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms