RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 KCNG1Q9UIX4 513 aa12.4□□□□□ -0.43
MSRB3-201ENST00000308259 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
MSRB3-201ENST00000308259 NEK11Q8NG66 645 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
MSRB3-201ENST00000308259 LEKR1Q6ZMV7 388 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 UPF3BQ9BZI7 483 aaKnown RBP12.39□□□□□ -0.43
MSRB3-201ENST00000308259 IL1RAPL2Q9NP60 686 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 AGLP35573 1532 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 RGS12O14924 1447 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 PIP4K2BP78356 416 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 E2F4Q16254 413 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 KCNH5Q8NCM2 988 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 PALD1Q9ULE6 856 aa12.39□□□□□ -0.43
MSRB3-201ENST00000308259 TPM4P67936 248 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 ZDHHC9Q9Y397 364 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
MSRB3-201ENST00000308259 PDE1AP54750 535 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 CCAR2Q8N163 923 aaKnown RBP12.38□□□□□ -0.43
MSRB3-201ENST00000308259 GDPD2Q9HCC8 539 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 ROBO2Q9HCK4 1378 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 MPHOSPH10O00566 681 aaKnown RBP12.38□□□□□ -0.43
MSRB3-201ENST00000308259 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
MSRB3-201ENST00000308259 LMBRD1Q9NUN5 540 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 RICTORQ6R327 1708 aa12.38□□□□□ -0.43
MSRB3-201ENST00000308259 SART3Q15020 963 aaKnown RBP12.38□□□□□ -0.43
MSRB3-201ENST00000308259 RNF216Q9NWF9 866 aaPredicted RBP12.38□□□□□ -0.43
MSRB3-201ENST00000308259 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 TTC31Q49AM3 519 aaPredicted RBP12.37□□□□□ -0.43
MSRB3-201ENST00000308259 USHBP1Q8N6Y0 703 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 GPT2Q8TD30 523 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 FEZ2Q9UHY8 353 aaPredicted RBP12.37□□□□□ -0.43
MSRB3-201ENST00000308259 LRRFIP2Q9Y608 721 aaKnown RBP12.37□□□□□ -0.43
MSRB3-201ENST00000308259 CLTCQ00610 1675 aaKnown RBP12.37□□□□□ -0.43
MSRB3-201ENST00000308259 ERC2O15083 957 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 AK7Q96M32 723 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 ARGLU1Q9NWB6 273 aaPredicted RBP12.37□□□□□ -0.43
MSRB3-201ENST00000308259 TMED8Q6PL24 325 aaPredicted RBP12.37□□□□□ -0.43
MSRB3-201ENST00000308259 UNC5CLQ8IV45 518 aa12.37□□□□□ -0.43
MSRB3-201ENST00000308259 CDC42BPGQ6DT37 1551 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 DLG5Q8TDM6 1919 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
MSRB3-201ENST00000308259 CNKSR2Q8WXI2 1034 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 AATKQ6ZMQ8 1374 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 UBAP1LF5GYI3 381 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 C1orf141Q5JVX7 400 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 NUTM1Q86Y26 1132 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 LMAN1P49257 510 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 SIRT1Q96EB6 747 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 REC8O95072 547 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 ICE2Q659A1 982 aa12.36□□□□□ -0.43
MSRB3-201ENST00000308259 NAA30Q147X3 362 aaPredicted RBP12.35□□□□□ -0.43
MSRB3-201ENST00000308259 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.35□□□□□ -0.43
MSRB3-201ENST00000308259 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 HMMRO75330 724 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 CLSTN1O94985 981 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 SLFN14P0C7P3 912 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 CAPN2P17655 700 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 BMS1Q14692 1282 aaKnown RBP12.35□□□□□ -0.43
MSRB3-201ENST00000308259 RBM33Q96EV2 1170 aaKnown RBP12.35□□□□□ -0.43
MSRB3-201ENST00000308259 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 TRIM5Q9C035 493 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 IL25Q9H293 177 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 TPM3P06753 285 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 MNAT1P51948 309 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 GYS2P54840 703 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 EYA1Q99502 592 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 GEMIN8Q9NWZ8 242 aaKnown RBP12.35□□□□□ -0.43
MSRB3-201ENST00000308259 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
MSRB3-201ENST00000308259 GNAI2P04899 355 aa12.34□□□□□ -0.43
MSRB3-201ENST00000308259 EIF2S2P20042 333 aaKnown RBP12.34□□□□□ -0.43
MSRB3-201ENST00000308259 LTKP29376 864 aa12.34□□□□□ -0.43
MSRB3-201ENST00000308259 CT47A1Q5JQC4 288 aaPredicted RBP12.34□□□□□ -0.43
MSRB3-201ENST00000308259 ZNF397Q8NF99 534 aaPredicted RBP12.34□□□□□ -0.43
MSRB3-201ENST00000308259 PRDM11Q9NQV5 511 aa12.34□□□□□ -0.43
MSRB3-201ENST00000308259 TMEM63CQ9P1W3 806 aa12.34□□□□□ -0.43
MSRB3-201ENST00000308259 FLIIQ13045 1269 aa12.34□□□□□ -0.43
MSRB3-201ENST00000308259 FAM212AQ96EL1 285 aa12.34□□□□□ -0.43
MSRB3-201ENST00000308259 PTPRCP08575 1304 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 ANXA1P04083 346 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 PLEKHG1Q9ULL1 1385 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 NRDCO43847 1150 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 CASQ1P31415 396 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 HOMER1Q86YM7 354 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 DHX16O60231 1041 aaKnown RBP12.33□□□□□ -0.44
MSRB3-201ENST00000308259 CYP2E1P05181 493 aaPredicted RBP12.33□□□□□ -0.44
MSRB3-201ENST00000308259 MX1P20591 662 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
MSRB3-201ENST00000308259 FAM184AQ8NB25 1140 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
MSRB3-201ENST00000308259 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms