RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 ANKRD62A6NC57 917 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 GOLGA6L10A6NI86 522 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 BAG6P46379 1132 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 UBAC1Q9BSL1 405 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 POTEJP0CG39 1038 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 TDO2P48775 406 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 PDILTQ8N807 584 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 TRPC5Q9UL62 973 aaPredicted RBP9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 GBP2P32456 591 aaPredicted RBP9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 PARP3Q9Y6F1 533 aa9.78□□□□□ -0.84
PCDHB1-201ENST00000306549 FAM177BA6PVY3 158 aa9.77□□□□□ -0.84
PCDHB1-201ENST00000306549 H0YHG0 523 aa9.77□□□□□ -0.84
PCDHB1-201ENST00000306549 HLA-DOAP06340 250 aa9.77□□□□□ -0.84
PCDHB1-201ENST00000306549 PRDM15P57071 1507 aaPredicted RBP9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 GOLGA6L7A0A1B0GV03 622 aa9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 MATR3P43243 847 aaKnown RBP eCLIP9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 HSPA2P54652 639 aa9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 AIDAQ96BJ3 306 aa9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 ZNF396Q96N95 335 aaPredicted RBP9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 CWC15Q9P013 229 aaKnown RBP9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 PARP10Q53GL7 1025 aa9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 UQCRFS1P1P0C7P4 283 aa9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 CCDC69A6NI79 296 aa9.77□□□□□ -0.85
PCDHB1-201ENST00000306549 IMMTQ16891 758 aaKnown RBP9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 LNPKQ9C0E8 428 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 PPP4R3AQ6IN85 833 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 MAP2P11137 1827 aaKnown RBP9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 ANKRD2Q9GZV1 360 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 ANKRD13DQ6ZTN6 518 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 AACSQ86V21 672 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 AEBP1Q8IUX7 1158 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 PDZRN3Q9UPQ7 1066 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 KINO60870 393 aaKnown RBP9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 IQCA1Q86XH1 822 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 LETM1O95202 739 aaPredicted RBP9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 ZFYP08048 801 aaPredicted RBP9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 SLFN5Q08AF3 891 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 HSP90AA2PQ14568 343 aaPredicted RBP9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 RAI14Q9P0K7 980 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 DACH1Q9UI36 760 aa9.76□□□□□ -0.85
PCDHB1-201ENST00000306549 DHX37Q8IY37 1157 aaKnown RBP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 CRACR2BQ8N4Y2 399 aaPredicted RBP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 JDP2Q8WYK2 163 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 SEC63Q9UGP8 760 aaKnown RBP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 NOL7Q9UMY1 257 aaKnown RBP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 DIP2AQ14689 1571 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 ALDH1L1O75891 902 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 FKBP4Q02790 459 aaKnown RBP eCLIP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 DIP2BQ9P265 1576 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 CYP46A1Q9Y6A2 500 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 PDE6BP35913 854 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 CETN2P41208 172 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 USP21Q9UK80 565 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 BTG4Q9NY30 223 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 THRAP3Q9Y2W1 955 aaKnown RBP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 TRPM1Q7Z4N2 1603 aa9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 CCDC12Q8WUD4 166 aaPredicted RBP9.75□□□□□ -0.85
PCDHB1-201ENST00000306549 ENOX2Q16206 610 aaKnown RBP9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 FOSBP53539 338 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 FLIIQ13045 1269 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 ZNF804AQ7Z570 1209 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 SUPT20HQ8NEM7 779 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 ERVV-2B6SEH9 535 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 USP5P45974 858 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 RBM19Q9Y4C8 960 aaKnown RBP9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 INSRP06213 1382 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 DISP3Q9P2K9 1392 aa9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 INO80Q9ULG1 1556 aaPredicted RBP9.74□□□□□ -0.85
PCDHB1-201ENST00000306549 ZNF76P36508 570 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 PAXIP1Q6ZW49 1069 aaPredicted RBP9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 PANK1Q8TE04 598 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 TFCP2L1Q9NZI6 479 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 PREX1Q8TCU6 1659 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 KIDINS220Q9ULH0 1771 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 E9PCH4 1651 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 PDE4BQ07343 736 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 FEZ1Q99689 392 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 DEF6Q9H4E7 631 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 EMILIN1Q9Y6C2 1016 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 MCM10Q7L590 875 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 ZSCAN31Q96LW9 406 aaPredicted RBP9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 ERCC6L2Q5T890 1561 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 ZHX3Q9H4I2 956 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 CEP131Q9UPN4 1083 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 DRC1Q96MC2 740 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 A0A1W2PP64 1363 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 KIF5BP33176 963 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 BICDL1Q6ZP65 573 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 NAPBQ9H115 298 aa9.73□□□□□ -0.85
PCDHB1-201ENST00000306549 PTPRTO14522 1441 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms