RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
HOXC10-201ENST00000303460 DAXXQ9UER7 740 aaPredicted RBP23.25■■□□□ 1.31
HOXC10-201ENST00000303460 NUP188Q5SRE5 1749 aa23.24■■□□□ 1.31
HOXC10-201ENST00000303460 PLBD2Q8NHP8 589 aa23.24■■□□□ 1.31
HOXC10-201ENST00000303460 MYD88Q99836 296 aa23.24■■□□□ 1.31
HOXC10-201ENST00000303460 PNMA6EA0A0J9YXQ4 647 aa23.23■■□□□ 1.31
HOXC10-201ENST00000303460 STARD3NLO95772 234 aa23.23■■□□□ 1.31
HOXC10-201ENST00000303460 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
HOXC10-201ENST00000303460 CHD1LQ86WJ1 897 aa23.23■■□□□ 1.31
HOXC10-201ENST00000303460 ATP8B2P98198 1209 aa23.23■■□□□ 1.31
HOXC10-201ENST00000303460 ANKRD45Q5TZF3 282 aa23.23■■□□□ 1.31
HOXC10-201ENST00000303460 LNPKQ9C0E8 428 aa23.23■■□□□ 1.31
HOXC10-201ENST00000303460 NEURL1BA8MQ27 555 aa23.22■■□□□ 1.31
HOXC10-201ENST00000303460 ONECUT3O60422 494 aaPredicted RBP23.22■■□□□ 1.31
HOXC10-201ENST00000303460 NEXNQ0ZGT2 675 aa23.22■■□□□ 1.31
HOXC10-201ENST00000303460 HMMRO75330 724 aa23.21■■□□□ 1.31
HOXC10-201ENST00000303460 C9orf78Q9NZ63 289 aaPredicted RBP23.21■■□□□ 1.31
HOXC10-201ENST00000303460 FAM182BQ5T319 152 aa23.21■■□□□ 1.31
HOXC10-201ENST00000303460 QTRT2Q9H974 415 aaKnown RBP23.21■■□□□ 1.31
HOXC10-201ENST00000303460 UTYO14607 1347 aa23.21■■□□□ 1.31
HOXC10-201ENST00000303460 IBTKQ9P2D0 1353 aaPredicted RBP23.2■■□□□ 1.31
HOXC10-201ENST00000303460 GRM8O00222 908 aa23.2■■□□□ 1.3
HOXC10-201ENST00000303460 PTF1AQ7RTS3 328 aa23.2■■□□□ 1.3
HOXC10-201ENST00000303460 AFDNP55196 1824 aaKnown RBP23.2■■□□□ 1.3
HOXC10-201ENST00000303460 PALLDQ8WX93 1383 aa23.2■■□□□ 1.3
HOXC10-201ENST00000303460 GCKRQ14397 625 aa23.19■■□□□ 1.3
HOXC10-201ENST00000303460 LOC102724428A0A0B4J2F2 783 aa23.18■■□□□ 1.3
HOXC10-201ENST00000303460 SIK1P57059 783 aa23.18■■□□□ 1.3
HOXC10-201ENST00000303460 ZBTB3Q9H5J0 574 aa23.18■■□□□ 1.3
HOXC10-201ENST00000303460 UPF2Q9HAU5 1272 aaKnown RBP23.18■■□□□ 1.3
HOXC10-201ENST00000303460 ZNF330Q9Y3S2 320 aaPredicted RBP23.18■■□□□ 1.3
HOXC10-201ENST00000303460 CICQ96RK0 1608 aaPredicted RBP23.18■■□□□ 1.3
HOXC10-201ENST00000303460 ATP5J2-PTCD1G3V325 749 aa23.18■■□□□ 1.3
HOXC10-201ENST00000303460 SEPT12Q8IYM1 358 aa23.18■■□□□ 1.3
HOXC10-201ENST00000303460 ZBTB1Q9Y2K1 713 aa23.18■■□□□ 1.3
HOXC10-201ENST00000303460 PPP1R42Q7Z4L9 355 aa23.17■■□□□ 1.3
HOXC10-201ENST00000303460 ATP6V1AP38606 617 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 SSH3Q8TE77 659 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 NHSQ6T4R5 1651 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 ITPK1Q13572 414 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 POLA2Q14181 598 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
HOXC10-201ENST00000303460 SUCLG2Q96I99 432 aa23.16■■□□□ 1.3
HOXC10-201ENST00000303460 APBB1O00213 710 aa23.14■■□□□ 1.3
HOXC10-201ENST00000303460 EXOC6BQ9Y2D4 811 aa23.14■■□□□ 1.3
HOXC10-201ENST00000303460 BTAF1O14981 1849 aa23.14■■□□□ 1.3
HOXC10-201ENST00000303460 SRGAP3O43295 1099 aa23.13■■□□□ 1.29
HOXC10-201ENST00000303460 SMARCA5O60264 1052 aaPredicted RBP23.13■■□□□ 1.29
HOXC10-201ENST00000303460 MTX1Q13505 466 aa23.13■■□□□ 1.29
HOXC10-201ENST00000303460 INTS5Q6P9B9 1019 aaKnown RBP23.13■■□□□ 1.29
HOXC10-201ENST00000303460 SBF2Q86WG5 1849 aa23.13■■□□□ 1.29
HOXC10-201ENST00000303460 RREB1Q92766 1687 aa23.13■■□□□ 1.29
HOXC10-201ENST00000303460 JARID2Q92833 1246 aaPredicted RBP23.12■■□□□ 1.29
HOXC10-201ENST00000303460 ZNF831Q5JPB2 1677 aa23.12■■□□□ 1.29
HOXC10-201ENST00000303460 RTL5Q5HYW3 569 aaPredicted RBP23.12■■□□□ 1.29
HOXC10-201ENST00000303460 COL5A3P25940 1745 aaPredicted RBP23.11■■□□□ 1.29
HOXC10-201ENST00000303460 MYH14Q7Z406 1995 aaKnown RBP23.11■■□□□ 1.29
HOXC10-201ENST00000303460 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
HOXC10-201ENST00000303460 KIF6Q6ZMV9 814 aa23.11■■□□□ 1.29
HOXC10-201ENST00000303460 BICC1Q9H694 974 aaKnown RBP23.11■■□□□ 1.29
HOXC10-201ENST00000303460 HDAC5Q9UQL6 1122 aa23.11■■□□□ 1.29
HOXC10-201ENST00000303460 MAP3K15Q6ZN16 1313 aa23.1■■□□□ 1.29
HOXC10-201ENST00000303460 IL6STP40189 918 aaPredicted RBP23.1■■□□□ 1.29
HOXC10-201ENST00000303460 C16orf71Q8IYS4 520 aaPredicted RBP23.1■■□□□ 1.29
HOXC10-201ENST00000303460 CCDC87Q9NVE4 849 aa23.1■■□□□ 1.29
HOXC10-201ENST00000303460 A0A087WZG4 1122 aa23.1■■□□□ 1.29
HOXC10-201ENST00000303460 CASP7P55210 303 aa23.1■■□□□ 1.29
HOXC10-201ENST00000303460 UBE3BQ7Z3V4 1068 aa23.1■■□□□ 1.29
HOXC10-201ENST00000303460 BRWD3Q6RI45 1802 aa23.09■■□□□ 1.29
HOXC10-201ENST00000303460 EPHA10Q5JZY3 1008 aa23.09■■□□□ 1.29
HOXC10-201ENST00000303460 ARXQ96QS3 562 aa23.09■■□□□ 1.29
HOXC10-201ENST00000303460 ISCA1Q9BUE6 129 aa23.09■■□□□ 1.29
HOXC10-201ENST00000303460 TCIRG1Q13488 830 aa23.08■■□□□ 1.29
HOXC10-201ENST00000303460 OTUD7AQ8TE49 926 aaPredicted RBP23.08■■□□□ 1.29
HOXC10-201ENST00000303460 BCL11AQ9H165 835 aa23.08■■□□□ 1.29
HOXC10-201ENST00000303460 CWC25Q9NXE8 425 aaPredicted RBP23.08■■□□□ 1.29
HOXC10-201ENST00000303460 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.28
HOXC10-201ENST00000303460 HLFQ16534 295 aa23.08■■□□□ 1.28
HOXC10-201ENST00000303460 KCNQ4P56696 695 aa23.07■■□□□ 1.28
HOXC10-201ENST00000303460 PLEKHM2Q8IWE5 1019 aa23.07■■□□□ 1.28
HOXC10-201ENST00000303460 CCDC191Q8NCU4 936 aa23.07■■□□□ 1.28
HOXC10-201ENST00000303460 H7C1W4 665 aa23.06■■□□□ 1.28
HOXC10-201ENST00000303460 SURF6O75683 361 aaKnown RBP23.06■■□□□ 1.28
HOXC10-201ENST00000303460 GIGYF2Q6Y7W6 1299 aaKnown RBP23.06■■□□□ 1.28
HOXC10-201ENST00000303460 COL15A1P39059 1388 aa23.06■■□□□ 1.28
HOXC10-201ENST00000303460 NBR1Q14596 966 aa23.06■■□□□ 1.28
HOXC10-201ENST00000303460 LINC00116Q8NCU8 138 aa23.06■■□□□ 1.28
HOXC10-201ENST00000303460 LRRCC1Q9C099 1032 aa23.06■■□□□ 1.28
HOXC10-201ENST00000303460 BECN1Q14457 450 aa23.05■■□□□ 1.28
HOXC10-201ENST00000303460 DZIP3Q86Y13 1208 aaKnown RBP23.05■■□□□ 1.28
HOXC10-201ENST00000303460 TBC1D2BQ9UPU7 963 aa23.05■■□□□ 1.28
HOXC10-201ENST00000303460 NUP98P52948 1817 aa23.04■■□□□ 1.28
HOXC10-201ENST00000303460 ANKRD36CQ5JPF3 1778 aa23.04■■□□□ 1.28
HOXC10-201ENST00000303460 TRIM28Q13263 835 aaKnown RBP23.04■■□□□ 1.28
HOXC10-201ENST00000303460 ZNF772Q68DY9 489 aaPredicted RBP23.03■■□□□ 1.28
HOXC10-201ENST00000303460 PA2G4Q9UQ80 394 aaKnown RBP23.03■■□□□ 1.28
HOXC10-201ENST00000303460 RABL6Q3YEC7 729 aaPredicted RBP23.02■■□□□ 1.28
HOXC10-201ENST00000303460 LY75O60449 1722 aa23.02■■□□□ 1.28
HOXC10-201ENST00000303460 ERVV-1B6SEH8 477 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms