RNA–Protein interactions for RNA: ENST00000302946.12

SLFNL1-201, Transcript of schlafen like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLFNL1, Length 1,951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFNL1-201ENST00000302946 EXOC6BQ9Y2D4 811 aa20.27■□□□□ 0.84
SLFNL1-201ENST00000302946 EIF5BO60841 1220 aaKnown RBP20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 ATG3Q9NT62 314 aa20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 USP16Q9Y5T5 823 aa20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 GSE1Q14687 1217 aa20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 PDIA6Q15084 440 aa20.26■□□□□ 0.83
SLFNL1-201ENST00000302946 ONECUT3O60422 494 aaPredicted RBP20.25■□□□□ 0.83
SLFNL1-201ENST00000302946 PDE1AP54750 535 aa20.25■□□□□ 0.83
SLFNL1-201ENST00000302946 ASAP1Q9ULH1 1129 aa20.25■□□□□ 0.83
SLFNL1-201ENST00000302946 UBTFL1P0CB47 393 aaPredicted RBP20.25■□□□□ 0.83
SLFNL1-201ENST00000302946 DNAAF4Q8WXU2 420 aa20.25■□□□□ 0.83
SLFNL1-201ENST00000302946 ANXA1P04083 346 aa20.24■□□□□ 0.83
SLFNL1-201ENST00000302946 DDIT3P35638 169 aa20.24■□□□□ 0.83
SLFNL1-201ENST00000302946 PROSER3Q2NL68 480 aa20.24■□□□□ 0.83
SLFNL1-201ENST00000302946 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
SLFNL1-201ENST00000302946 SRCIN1Q9C0H9 1055 aa20.24■□□□□ 0.83
SLFNL1-201ENST00000302946 ADCY9O60503 1353 aa20.23■□□□□ 0.83
SLFNL1-201ENST00000302946 KSR2Q6VAB6 950 aa20.23■□□□□ 0.83
SLFNL1-201ENST00000302946 QTRT2Q9H974 415 aaKnown RBP20.23■□□□□ 0.83
SLFNL1-201ENST00000302946 CHMP5Q9NZZ3 219 aa20.23■□□□□ 0.83
SLFNL1-201ENST00000302946 CD2BP2O95400 341 aaKnown RBP20.23■□□□□ 0.83
SLFNL1-201ENST00000302946 BEND3Q5T5X7 828 aa20.23■□□□□ 0.83
SLFNL1-201ENST00000302946 PI4KAP2A4QPH2 592 aa20.22■□□□□ 0.83
SLFNL1-201ENST00000302946 PI4KAP1Q8N8J0 262 aa20.22■□□□□ 0.83
SLFNL1-201ENST00000302946 SSH3Q8TE77 659 aa20.22■□□□□ 0.83
SLFNL1-201ENST00000302946 SMARCC1Q92922 1105 aaPredicted RBP20.22■□□□□ 0.83
SLFNL1-201ENST00000302946 RBM42Q9BTD8 480 aaKnown RBP20.21■□□□□ 0.83
SLFNL1-201ENST00000302946 USP26Q9BXU7 913 aa20.21■□□□□ 0.83
SLFNL1-201ENST00000302946 STARD3NLO95772 234 aa20.21■□□□□ 0.83
SLFNL1-201ENST00000302946 MYL6BP14649 208 aa20.21■□□□□ 0.83
SLFNL1-201ENST00000302946 ZNF772Q68DY9 489 aaPredicted RBP20.21■□□□□ 0.83
SLFNL1-201ENST00000302946 ACSBG1Q96GR2 724 aa20.21■□□□□ 0.83
SLFNL1-201ENST00000302946 POLA2Q14181 598 aa20.2■□□□□ 0.82
SLFNL1-201ENST00000302946 CASC1Q6TDU7 716 aa20.19■□□□□ 0.82
SLFNL1-201ENST00000302946 LRP10Q7Z4F1 713 aa20.19■□□□□ 0.82
SLFNL1-201ENST00000302946 ILDR1Q86SU0 546 aaPredicted RBP20.19■□□□□ 0.82
SLFNL1-201ENST00000302946 XAGE3Q8WTP9 111 aa20.19■□□□□ 0.82
SLFNL1-201ENST00000302946 MAP3K2Q9Y2U5 619 aa20.19■□□□□ 0.82
SLFNL1-201ENST00000302946 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
SLFNL1-201ENST00000302946 NBPF7P0C2Y1 421 aaPredicted RBP20.18■□□□□ 0.82
SLFNL1-201ENST00000302946 MX1P20591 662 aa20.18■□□□□ 0.82
SLFNL1-201ENST00000302946 COPS6Q7L5N1 327 aa20.18■□□□□ 0.82
SLFNL1-201ENST00000302946 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
SLFNL1-201ENST00000302946 K7ELQ4 463 aaPredicted RBP20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 AIMP1Q12904 312 aaKnown RBP20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 TSHZ3Q63HK5 1081 aa20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 PPP1R42Q7Z4L9 355 aa20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 RIC3Q7Z5B4 369 aa20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 STAP2Q9UGK3 403 aa20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 DNAJC10Q8IXB1 793 aa20.17■□□□□ 0.82
SLFNL1-201ENST00000302946 NEXNQ0ZGT2 675 aa20.16■□□□□ 0.82
SLFNL1-201ENST00000302946 RABEP1Q15276 862 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 ANKRD13DQ6ZTN6 518 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 HDAC5Q9UQL6 1122 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 PALLDQ8WX93 1383 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 ERC2O15083 957 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 NBPF14Q5TI25 921 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 LINS1Q8NG48 757 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 KAT6BQ8WYB5 2073 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 AOX1Q06278 1338 aa20.15■□□□□ 0.82
SLFNL1-201ENST00000302946 RAB11FIP3O75154 756 aa20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 REC8O95072 547 aa20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 A1BGP04217 495 aa20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 MCM4P33991 863 aa20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 PLBD2Q8NHP8 589 aa20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 NHSQ6T4R5 1651 aa20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 CIZ1Q9ULV3 898 aaPredicted RBP20.14■□□□□ 0.81
SLFNL1-201ENST00000302946 SRGAP3O43295 1099 aa20.13■□□□□ 0.81
SLFNL1-201ENST00000302946 RBM6P78332 1123 aaKnown RBP20.13■□□□□ 0.81
SLFNL1-201ENST00000302946 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
SLFNL1-201ENST00000302946 LOC102724428A0A0B4J2F2 783 aa20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 CYP19A1P11511 503 aaPredicted RBP20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 SIK1P57059 783 aa20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 SLC4A9Q96Q91 983 aa20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 TJP1Q07157 1748 aa20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 KCNQ2O43526 872 aa20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 SURF6O75683 361 aaKnown RBP20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 PIP4K2AP48426 406 aaPredicted RBP20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 IL1RAPL2Q9NP60 686 aa20.12■□□□□ 0.81
SLFNL1-201ENST00000302946 ZNF831Q5JPB2 1677 aa20.11■□□□□ 0.81
SLFNL1-201ENST00000302946 MTX1Q13505 466 aa20.11■□□□□ 0.81
SLFNL1-201ENST00000302946 RHPN1Q8TCX5 695 aa20.11■□□□□ 0.81
SLFNL1-201ENST00000302946 ATP6V1AP38606 617 aa20.1■□□□□ 0.81
SLFNL1-201ENST00000302946 ESYT1Q9BSJ8 1104 aa20.1■□□□□ 0.81
SLFNL1-201ENST00000302946 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
SLFNL1-201ENST00000302946 KIF1BPQ96EK5 621 aa20.08■□□□□ 0.81
SLFNL1-201ENST00000302946 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
SLFNL1-201ENST00000302946 AK9Q5TCS8 1911 aa20.08■□□□□ 0.81
SLFNL1-201ENST00000302946 CHMLP26374 656 aa20.08■□□□□ 0.8
SLFNL1-201ENST00000302946 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.8
SLFNL1-201ENST00000302946 RAB3GAP1Q15042 981 aa20.08■□□□□ 0.8
SLFNL1-201ENST00000302946 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.8
SLFNL1-201ENST00000302946 NUTM1Q86Y26 1132 aa20.08■□□□□ 0.8
SLFNL1-201ENST00000302946 MYD88Q99836 296 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms