RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
UBXN1-202ENST00000301935 IL16Q14005 1332 aa19.65■□□□□ 0.74
UBXN1-202ENST00000301935 A0A087WZG4 1122 aa19.64■□□□□ 0.73
UBXN1-202ENST00000301935 GOLGA2Q08379 1002 aa19.64■□□□□ 0.73
UBXN1-202ENST00000301935 TEFQ10587 303 aa19.64■□□□□ 0.73
UBXN1-202ENST00000301935 ZNF790Q6PG37 636 aa19.64■□□□□ 0.73
UBXN1-202ENST00000301935 BICDL1Q6ZP65 573 aa19.64■□□□□ 0.73
UBXN1-202ENST00000301935 KLRG1Q96E93 195 aa19.64■□□□□ 0.73
UBXN1-202ENST00000301935 ZNF496Q96IT1 587 aaPredicted RBP19.64■□□□□ 0.73
UBXN1-202ENST00000301935 H0YIN7 160 aa19.63■□□□□ 0.73
UBXN1-202ENST00000301935 SMC1BQ8NDV3 1235 aa19.63■□□□□ 0.73
UBXN1-202ENST00000301935 DICER1Q9UPY3 1922 aaKnown RBP19.63■□□□□ 0.73
UBXN1-202ENST00000301935 FER1L6Q2WGJ9 1857 aa19.62■□□□□ 0.73
UBXN1-202ENST00000301935 NFKBIEO00221 500 aa19.62■□□□□ 0.73
UBXN1-202ENST00000301935 TBC1D9BQ66K14 1250 aa19.62■□□□□ 0.73
UBXN1-202ENST00000301935 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
UBXN1-202ENST00000301935 CACNA1SQ13698 1873 aa19.62■□□□□ 0.73
UBXN1-202ENST00000301935 DLG5Q8TDM6 1919 aa19.61■□□□□ 0.73
UBXN1-202ENST00000301935 CEMIPQ8WUJ3 1361 aa19.61■□□□□ 0.73
UBXN1-202ENST00000301935 GLTPD2A6NH11 291 aa19.61■□□□□ 0.73
UBXN1-202ENST00000301935 E9PSI1 815 aa19.61■□□□□ 0.73
UBXN1-202ENST00000301935 CENPBP07199 599 aaPredicted RBP19.61■□□□□ 0.73
UBXN1-202ENST00000301935 TEX13AQ9BXU3 409 aaPredicted RBP19.61■□□□□ 0.73
UBXN1-202ENST00000301935 ARFGEF2Q9Y6D5 1785 aa19.61■□□□□ 0.73
UBXN1-202ENST00000301935 IL6STP40189 918 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-202ENST00000301935 JMYQ8N9B5 988 aa19.6■□□□□ 0.73
UBXN1-202ENST00000301935 PRR5LQ6MZQ0 368 aa19.59■□□□□ 0.73
UBXN1-202ENST00000301935 FMNL2Q96PY5 1086 aa19.59■□□□□ 0.73
UBXN1-202ENST00000301935 MYH16Q9H6N6 1097 aa19.59■□□□□ 0.73
UBXN1-202ENST00000301935 BABAM1Q9NWV8 329 aa19.59■□□□□ 0.73
UBXN1-202ENST00000301935 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
UBXN1-202ENST00000301935 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
UBXN1-202ENST00000301935 ZNF330Q9Y3S2 320 aaPredicted RBP19.59■□□□□ 0.73
UBXN1-202ENST00000301935 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
UBXN1-202ENST00000301935 PDE6BP35913 854 aa19.58■□□□□ 0.72
UBXN1-202ENST00000301935 GNAI1P63096 354 aa19.58■□□□□ 0.72
UBXN1-202ENST00000301935 BRIP1Q9BX63 1249 aa19.58■□□□□ 0.72
UBXN1-202ENST00000301935 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
UBXN1-202ENST00000301935 SLFN5Q08AF3 891 aa19.56■□□□□ 0.72
UBXN1-202ENST00000301935 ZNF622Q969S3 477 aaKnown RBP eCLIP19.56■□□□□ 0.72
UBXN1-202ENST00000301935 C21orf2O43822 256 aa19.55■□□□□ 0.72
UBXN1-202ENST00000301935 CAMTA2O94983 1202 aa19.55■□□□□ 0.72
UBXN1-202ENST00000301935 MCM10Q7L590 875 aa19.55■□□□□ 0.72
UBXN1-202ENST00000301935 TRMT2AQ8IZ69 625 aaKnown RBP19.55■□□□□ 0.72
UBXN1-202ENST00000301935 CCDC24Q8N4L8 307 aa19.55■□□□□ 0.72
UBXN1-202ENST00000301935 CFAP44Q96MT7 982 aa19.55■□□□□ 0.72
UBXN1-202ENST00000301935 SLX4Q8IY92 1834 aa19.55■□□□□ 0.72
UBXN1-202ENST00000301935 PCNTO95613 3336 aa19.54■□□□□ 0.72
UBXN1-202ENST00000301935 KCNQ3O43525 872 aa19.54■□□□□ 0.72
UBXN1-202ENST00000301935 A1BGP04217 495 aa19.54■□□□□ 0.72
UBXN1-202ENST00000301935 TAF7Q15545 349 aaPredicted RBP19.54■□□□□ 0.72
UBXN1-202ENST00000301935 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
UBXN1-202ENST00000301935 CNBD1Q8NA66 436 aa19.54■□□□□ 0.72
UBXN1-202ENST00000301935 BTBD11A6QL63 1104 aa19.53■□□□□ 0.72
UBXN1-202ENST00000301935 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
UBXN1-202ENST00000301935 DCTN1Q14203 1278 aa19.53■□□□□ 0.72
UBXN1-202ENST00000301935 SETDB2Q96T68 719 aa19.53■□□□□ 0.72
UBXN1-202ENST00000301935 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
UBXN1-202ENST00000301935 LTBP3Q9NS15 1303 aa19.52■□□□□ 0.72
UBXN1-202ENST00000301935 POTECB2RU33 542 aa19.52■□□□□ 0.72
UBXN1-202ENST00000301935 ST5P78524 1137 aa19.52■□□□□ 0.72
UBXN1-202ENST00000301935 ERFEQ4G0M1 354 aa19.52■□□□□ 0.72
UBXN1-202ENST00000301935 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
UBXN1-202ENST00000301935 DZIP3Q86Y13 1208 aaKnown RBP19.52■□□□□ 0.72
UBXN1-202ENST00000301935 CHL1O00533 1208 aa19.51■□□□□ 0.71
UBXN1-202ENST00000301935 NPHP1O15259 732 aa19.51■□□□□ 0.71
UBXN1-202ENST00000301935 TAOK3Q9H2K8 898 aa19.51■□□□□ 0.71
UBXN1-202ENST00000301935 LAMB4A4D0S4 1761 aa19.51■□□□□ 0.71
UBXN1-202ENST00000301935 SRGNP10124 158 aa19.5■□□□□ 0.71
UBXN1-202ENST00000301935 DUSP27Q5VZP5 1158 aa19.5■□□□□ 0.71
UBXN1-202ENST00000301935 STYK1Q6J9G0 422 aa19.5■□□□□ 0.71
UBXN1-202ENST00000301935 CNKSR1Q969H4 720 aa19.5■□□□□ 0.71
UBXN1-202ENST00000301935 CDCA7LQ96GN5 454 aa19.5■□□□□ 0.71
UBXN1-202ENST00000301935 THUMPD2Q9BTF0 503 aaKnown RBP19.5■□□□□ 0.71
UBXN1-202ENST00000301935 PIP4K2AP48426 406 aaPredicted RBP19.49■□□□□ 0.71
UBXN1-202ENST00000301935 COL13A1Q5TAT6 717 aaPredicted RBP19.49■□□□□ 0.71
UBXN1-202ENST00000301935 PRPF40BQ6NWY9 871 aaKnown RBP19.49■□□□□ 0.71
UBXN1-202ENST00000301935 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
UBXN1-202ENST00000301935 PRAMEF22A3QJZ6 481 aa19.48■□□□□ 0.71
UBXN1-202ENST00000301935 CT47B1P0C2W7 299 aaPredicted RBP19.48■□□□□ 0.71
UBXN1-202ENST00000301935 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
UBXN1-202ENST00000301935 MASTLQ96GX5 879 aa19.48■□□□□ 0.71
UBXN1-202ENST00000301935 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
UBXN1-202ENST00000301935 SPINK5Q9NQ38 1064 aaPredicted RBP19.47■□□□□ 0.71
UBXN1-202ENST00000301935 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
UBXN1-202ENST00000301935 SNRPA1P09661 255 aaKnown RBP19.46■□□□□ 0.71
UBXN1-202ENST00000301935 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
UBXN1-202ENST00000301935 ZNF652Q9Y2D9 606 aa19.46■□□□□ 0.71
UBXN1-202ENST00000301935 SCN4AP35499 1836 aa19.46■□□□□ 0.71
UBXN1-202ENST00000301935 NBPF5PQ86XG9 351 aaPredicted RBP19.45■□□□□ 0.7
UBXN1-202ENST00000301935 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
UBXN1-202ENST00000301935 MBIPQ9NS73 344 aa19.45■□□□□ 0.7
UBXN1-202ENST00000301935 FANCIQ9NVI1 1328 aa19.45■□□□□ 0.7
UBXN1-202ENST00000301935 KDM3BQ7LBC6 1761 aa19.44■□□□□ 0.7
UBXN1-202ENST00000301935 RGL2O15211 777 aa19.43■□□□□ 0.7
UBXN1-202ENST00000301935 DDNO94850 711 aaPredicted RBP19.43■□□□□ 0.7
UBXN1-202ENST00000301935 HSPA1AP0DMV8 641 aaKnown RBP19.43■□□□□ 0.7
UBXN1-202ENST00000301935 HSPA1BP0DMV9 641 aaKnown RBP19.43■□□□□ 0.7
UBXN1-202ENST00000301935 CCDC93Q567U6 631 aa19.43■□□□□ 0.7
UBXN1-202ENST00000301935 ZNF428Q96B54 188 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms