RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SMARCE1Q969G3 411 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 SNRKQ9NRH2 765 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 SLAIN2Q9P270 581 aa20.77■□□□□ 0.92
CDC42EP3-201ENST00000295324 CFAP43Q8NDM7 1665 aa20.77■□□□□ 0.91
CDC42EP3-201ENST00000295324 TRAK2O60296 914 aa20.77■□□□□ 0.91
CDC42EP3-201ENST00000295324 PARP3Q9Y6F1 533 aa20.77■□□□□ 0.91
CDC42EP3-201ENST00000295324 GRM8O00222 908 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 ZFYVE16Q7Z3T8 1539 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 ZGPATQ8N5A5 531 aaKnown RBP20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 JARID2Q92833 1246 aaPredicted RBP20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 SPATA32Q96LK8 384 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 FEZ1Q99689 392 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 TMEM2Q9UHN6 1383 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 WDR78Q5VTH9 848 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 SLC12A7Q9Y666 1083 aa20.76■□□□□ 0.91
CDC42EP3-201ENST00000295324 RNF214Q8ND24 703 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 ARHGEF12Q9NZN5 1544 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 SMC2O95347 1197 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 PDE4BQ07343 736 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 DDX11Q96FC9 970 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 HDAC9Q9UKV0 1011 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 ARHGEF10O15013 1369 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 IFIT3O14879 490 aaKnown RBP20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 LINS1Q8NG48 757 aa20.75■□□□□ 0.91
CDC42EP3-201ENST00000295324 CCDC173Q0VFZ6 552 aa20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 CUL5Q93034 780 aa20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 ATP2B3Q16720 1220 aa20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 LMBR1LQ6UX01 489 aa20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 SH2B1Q9NRF2 756 aaPredicted RBP20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 CIZ1Q9ULV3 898 aaPredicted RBP20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 TNMDQ9H2S6 317 aa20.74■□□□□ 0.91
CDC42EP3-201ENST00000295324 DNMT1P26358 1616 aaKnown RBP20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 CATIPQ7Z7H3 387 aa20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 OGFOD1Q8N543 542 aa20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 PDCL3Q9H2J4 239 aa20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 TSPY26PQ9H489 355 aa20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 BRPF1P55201 1214 aaPredicted RBP20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 UPF3BQ9BZI7 483 aaKnown RBP20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 CRNKL1Q9BZJ0 848 aaKnown RBP20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 MAST1Q9Y2H9 1570 aa20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 IL15P40933 162 aaPredicted RBP20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 PLEKHH1Q9ULM0 1364 aa20.73■□□□□ 0.91
CDC42EP3-201ENST00000295324 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
CDC42EP3-201ENST00000295324 CCDC192P0DO97 292 aa20.72■□□□□ 0.91
CDC42EP3-201ENST00000295324 RHPN1Q8TCX5 695 aa20.72■□□□□ 0.91
CDC42EP3-201ENST00000295324 ADGRL2O95490 1459 aa20.72■□□□□ 0.91
CDC42EP3-201ENST00000295324 ZNHIT6Q9NWK9 470 aaKnown RBP20.72■□□□□ 0.91
CDC42EP3-201ENST00000295324 RDXP35241 583 aaKnown RBP20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 NASPP49321 788 aaPredicted RBP20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 VSIG10Q8N0Z9 540 aa20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 MRE11P49959 708 aa20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 CEP57L1Q8IYX8 460 aa20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 C8orf58Q8NAV2 365 aa20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 ZFYP08048 801 aaPredicted RBP20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 PAF1Q8N7H5 531 aa20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 EHMT1Q9H9B1 1298 aa20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 SOS1Q07889 1333 aaPredicted RBP20.71■□□□□ 0.91
CDC42EP3-201ENST00000295324 HMGN5P82970 282 aaKnown RBP20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 TRAPPC3LQ5T215 181 aa20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 EDC4Q6P2E9 1401 aaKnown RBP20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 KIF5BP33176 963 aa20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 CARD14Q9BXL6 1004 aa20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 ZC3H12CQ9C0D7 883 aaKnown RBP20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 CCDC83Q8IWF9 413 aa20.7■□□□□ 0.9
CDC42EP3-201ENST00000295324 SBNO1A3KN83 1393 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 STK32BQ9NY57 414 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 ZNF804AQ7Z570 1209 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 MEIS3Q99687 375 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 RAB34Q9BZG1 259 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 PARD3Q8TEW0 1356 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 GOLGA8AA7E2F4 631 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 GOLGA8BA8MQT2 603 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 TANGO6Q9C0B7 1094 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 SERPINC1P01008 464 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 C8orf76Q96K31 380 aa20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 PHAXQ9H814 394 aaKnown RBP20.69■□□□□ 0.9
CDC42EP3-201ENST00000295324 DHX8Q14562 1220 aaKnown RBP20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 LUC7LQ9NQ29 371 aaKnown RBP20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 MAPKBP1O60336 1514 aa20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 GNPATO15228 680 aa20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 MFSD6Q6ZSS7 791 aa20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 MNS1Q8NEH6 495 aa20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 CCDC12Q8WUD4 166 aaPredicted RBP20.68■□□□□ 0.9
CDC42EP3-201ENST00000295324 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 MRPL50Q8N5N7 158 aaKnown RBP20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 JDP2Q8WYK2 163 aa20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 KAT6BQ8WYB5 2073 aa20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 PZPP20742 1482 aa20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 IRS4O14654 1257 aaPredicted RBP20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 MATR3P43243 847 aaKnown RBP eCLIP20.67■□□□□ 0.9
CDC42EP3-201ENST00000295324 CCDC194A0A1B0GVG4 234 aa20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 PPP4R3BQ5MIZ7 849 aa20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 CCDC82Q8N4S0 544 aa20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 SSRP1Q08945 709 aaKnown RBP20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 KAT14Q9H8E8 782 aa20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
CDC42EP3-201ENST00000295324 EYA3Q99504 573 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms