RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 PI4KAP2A4QPH2 592 aa20.86■□□□□ 0.93
CPSF4-201ENST00000292476 SLC4A3P48751 1232 aa20.86■□□□□ 0.93
CPSF4-201ENST00000292476 PI4KAP1Q8N8J0 262 aa20.86■□□□□ 0.93
CPSF4-201ENST00000292476 PIGBQ92521 554 aa20.86■□□□□ 0.93
CPSF4-201ENST00000292476 USP16Q9Y5T5 823 aa20.86■□□□□ 0.93
CPSF4-201ENST00000292476 PDIA6Q15084 440 aa20.86■□□□□ 0.93
CPSF4-201ENST00000292476 GNAI2P04899 355 aa20.85■□□□□ 0.93
CPSF4-201ENST00000292476 KCPQ6ZWJ8 1503 aa20.85■□□□□ 0.93
CPSF4-201ENST00000292476 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
CPSF4-201ENST00000292476 N4BP2Q86UW6 1770 aaPredicted RBP20.85■□□□□ 0.93
CPSF4-201ENST00000292476 C5P01031 1676 aa20.85■□□□□ 0.93
CPSF4-201ENST00000292476 HMMRO75330 724 aa20.84■□□□□ 0.93
CPSF4-201ENST00000292476 ALDH1L1O75891 902 aa20.84■□□□□ 0.93
CPSF4-201ENST00000292476 NUCB1Q02818 461 aa20.84■□□□□ 0.93
CPSF4-201ENST00000292476 R3HDM1Q15032 1099 aaKnown RBP20.83■□□□□ 0.93
CPSF4-201ENST00000292476 ANKRD44Q8N8A2 993 aa20.83■□□□□ 0.93
CPSF4-201ENST00000292476 MEIS3Q99687 375 aa20.83■□□□□ 0.93
CPSF4-201ENST00000292476 IBTKQ9P2D0 1353 aaPredicted RBP20.83■□□□□ 0.92
CPSF4-201ENST00000292476 PTCD1O75127 700 aaKnown RBP20.83■□□□□ 0.92
CPSF4-201ENST00000292476 ANXA1P04083 346 aa20.83■□□□□ 0.92
CPSF4-201ENST00000292476 PROSER3Q2NL68 480 aa20.83■□□□□ 0.92
CPSF4-201ENST00000292476 BEND3Q5T5X7 828 aa20.83■□□□□ 0.92
CPSF4-201ENST00000292476 ATG3Q9NT62 314 aa20.83■□□□□ 0.92
CPSF4-201ENST00000292476 ADCY9O60503 1353 aa20.82■□□□□ 0.92
CPSF4-201ENST00000292476 STARD3NLO95772 234 aa20.82■□□□□ 0.92
CPSF4-201ENST00000292476 MYL6BP14649 208 aa20.82■□□□□ 0.92
CPSF4-201ENST00000292476 NEXNQ0ZGT2 675 aa20.82■□□□□ 0.92
CPSF4-201ENST00000292476 RIC3Q7Z5B4 369 aa20.82■□□□□ 0.92
CPSF4-201ENST00000292476 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
CPSF4-201ENST00000292476 UBTFL1P0CB47 393 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-201ENST00000292476 KCNQ4P56696 695 aa20.81■□□□□ 0.92
CPSF4-201ENST00000292476 NBPF14Q5TI25 921 aa20.81■□□□□ 0.92
CPSF4-201ENST00000292476 C1orf115Q9H7X2 142 aa20.81■□□□□ 0.92
CPSF4-201ENST00000292476 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
CPSF4-201ENST00000292476 LY75O60449 1722 aa20.81■□□□□ 0.92
CPSF4-201ENST00000292476 LINS1Q8NG48 757 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 ASAP1Q9ULH1 1129 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 AIMP1Q12904 312 aaKnown RBP20.8■□□□□ 0.92
CPSF4-201ENST00000292476 CEP85Q6P2H3 762 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 ANKRD13DQ6ZTN6 518 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 XAGE3Q8WTP9 111 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 LRRC4BQ9NT99 713 aa20.8■□□□□ 0.92
CPSF4-201ENST00000292476 USP44Q9H0E7 712 aa20.79■□□□□ 0.92
CPSF4-201ENST00000292476 LRP10Q7Z4F1 713 aa20.77■□□□□ 0.92
CPSF4-201ENST00000292476 CHD1LQ86WJ1 897 aa20.77■□□□□ 0.92
CPSF4-201ENST00000292476 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.92
CPSF4-201ENST00000292476 RBM42Q9BTD8 480 aaKnown RBP20.77■□□□□ 0.92
CPSF4-201ENST00000292476 PALLDQ8WX93 1383 aa20.77■□□□□ 0.92
CPSF4-201ENST00000292476 SIRT2Q8IXJ6 389 aa20.77■□□□□ 0.91
CPSF4-201ENST00000292476 PLBD2Q8NHP8 589 aa20.77■□□□□ 0.91
CPSF4-201ENST00000292476 DCTPP1Q9H773 170 aa20.77■□□□□ 0.91
CPSF4-201ENST00000292476 GSE1Q14687 1217 aa20.76■□□□□ 0.91
CPSF4-201ENST00000292476 METTL22Q9BUU2 404 aaPredicted RBP20.76■□□□□ 0.91
CPSF4-201ENST00000292476 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
CPSF4-201ENST00000292476 CCNL1Q9UK58 526 aaPredicted RBP20.76■□□□□ 0.91
CPSF4-201ENST00000292476 SLC27A3Q5K4L6 730 aa20.75■□□□□ 0.91
CPSF4-201ENST00000292476 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
CPSF4-201ENST00000292476 BMP2KLQ5H9B9 411 aa20.74■□□□□ 0.91
CPSF4-201ENST00000292476 C22orf23Q9BZE7 217 aa20.74■□□□□ 0.91
CPSF4-201ENST00000292476 STK32BQ9NY57 414 aa20.74■□□□□ 0.91
CPSF4-201ENST00000292476 ANTXR1Q9H6X2 564 aa20.73■□□□□ 0.91
CPSF4-201ENST00000292476 NBPF26B4DH59 902 aa20.73■□□□□ 0.91
CPSF4-201ENST00000292476 EIF5BO60841 1220 aaKnown RBP20.73■□□□□ 0.91
CPSF4-201ENST00000292476 NBPF10Q6P3W6 841 aaKnown RBP20.73■□□□□ 0.91
CPSF4-201ENST00000292476 NBPF15Q8N660 670 aa20.73■□□□□ 0.91
CPSF4-201ENST00000292476 A1BGP04217 495 aa20.72■□□□□ 0.91
CPSF4-201ENST00000292476 SLC15A2Q16348 729 aa20.72■□□□□ 0.91
CPSF4-201ENST00000292476 ZNF827Q17R98 1081 aa20.72■□□□□ 0.91
CPSF4-201ENST00000292476 DNAJC10Q8IXB1 793 aa20.72■□□□□ 0.91
CPSF4-201ENST00000292476 TBC1D2Q9BYX2 928 aa20.72■□□□□ 0.91
CPSF4-201ENST00000292476 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
CPSF4-201ENST00000292476 UTYO14607 1347 aa20.71■□□□□ 0.91
CPSF4-201ENST00000292476 ANKRD45Q5TZF3 282 aa20.71■□□□□ 0.91
CPSF4-201ENST00000292476 GRM8O00222 908 aa20.7■□□□□ 0.91
CPSF4-201ENST00000292476 RBM25P49756 843 aaKnown RBP20.7■□□□□ 0.9
CPSF4-201ENST00000292476 MYD88Q99836 296 aa20.7■□□□□ 0.9
CPSF4-201ENST00000292476 SRCAPQ6ZRS2 3230 aa20.7■□□□□ 0.9
CPSF4-201ENST00000292476 NEURL1BA8MQ27 555 aa20.69■□□□□ 0.9
CPSF4-201ENST00000292476 FRAT2O75474 233 aaPredicted RBP20.69■□□□□ 0.9
CPSF4-201ENST00000292476 KIF6Q6ZMV9 814 aa20.69■□□□□ 0.9
CPSF4-201ENST00000292476 PDGFDQ9GZP0 370 aaPredicted RBP20.69■□□□□ 0.9
CPSF4-201ENST00000292476 TAF1LQ8IZX4 1826 aa20.69■□□□□ 0.9
CPSF4-201ENST00000292476 LOC102724428A0A0B4J2F2 783 aa20.68■□□□□ 0.9
CPSF4-201ENST00000292476 NBPF7P0C2Y1 421 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-201ENST00000292476 CYP19A1P11511 503 aaPredicted RBP20.68■□□□□ 0.9
CPSF4-201ENST00000292476 SIK1P57059 783 aa20.68■□□□□ 0.9
CPSF4-201ENST00000292476 LNPKQ9C0E8 428 aa20.68■□□□□ 0.9
CPSF4-201ENST00000292476 PIP4K2AP48426 406 aaPredicted RBP20.67■□□□□ 0.9
CPSF4-201ENST00000292476 MFAP1P55081 439 aaKnown RBP20.67■□□□□ 0.9
CPSF4-201ENST00000292476 GCKRQ14397 625 aa20.67■□□□□ 0.9
CPSF4-201ENST00000292476 CWF19L2Q2TBE0 894 aaKnown RBP20.67■□□□□ 0.9
CPSF4-201ENST00000292476 IGKV5-2P06315 115 aa20.67■□□□□ 0.9
CPSF4-201ENST00000292476 MTX1Q13505 466 aa20.67■□□□□ 0.9
CPSF4-201ENST00000292476 SSH3Q8TE77 659 aa20.67■□□□□ 0.9
CPSF4-201ENST00000292476 AKT1S1Q96B36 256 aa20.67■□□□□ 0.9
CPSF4-201ENST00000292476 TUBGCP6Q96RT7 1819 aa20.66■□□□□ 0.9
CPSF4-201ENST00000292476 IL6STP40189 918 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-201ENST00000292476 HSP90AB4PQ58FF6 505 aa20.66■□□□□ 0.9
CPSF4-201ENST00000292476 CASZ1Q86V15 1759 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms