RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 LRP10Q7Z4F1 713 aa23.31■■□□□ 1.32
SHF-201ENST00000290894 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
SHF-201ENST00000290894 AK9Q5TCS8 1911 aa23.31■■□□□ 1.32
SHF-201ENST00000290894 PCDH11XQ9BZA7 1347 aa23.3■■□□□ 1.32
SHF-201ENST00000290894 PCDH11YQ9BZA8 1340 aa23.3■■□□□ 1.32
SHF-201ENST00000290894 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
SHF-201ENST00000290894 GCKRQ14397 625 aa23.29■■□□□ 1.32
SHF-201ENST00000290894 HSP90AB4PQ58FF6 505 aa23.29■■□□□ 1.32
SHF-201ENST00000290894 TNPO1Q92973 898 aaKnown RBP23.29■■□□□ 1.32
SHF-201ENST00000290894 METTL22Q9BUU2 404 aaPredicted RBP23.29■■□□□ 1.32
SHF-201ENST00000290894 IL2RBP14784 551 aa23.28■■□□□ 1.32
SHF-201ENST00000290894 CLASRPQ8N2M8 674 aaKnown RBP23.28■■□□□ 1.32
SHF-201ENST00000290894 MRC1P22897 1456 aa23.28■■□□□ 1.32
SHF-201ENST00000290894 ABCC6O95255 1503 aa23.28■■□□□ 1.32
SHF-201ENST00000290894 GZF1Q9H116 711 aaPredicted RBP23.28■■□□□ 1.32
SHF-201ENST00000290894 AACSQ86V21 672 aa23.27■■□□□ 1.32
SHF-201ENST00000290894 AOX1Q06278 1338 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 KAT6BQ8WYB5 2073 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 NOL8Q76FK4 1167 aaKnown RBP23.26■■□□□ 1.31
SHF-201ENST00000290894 UBE3BQ7Z3V4 1068 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 UTYO14607 1347 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 NBPF26B4DH59 902 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 NEK4P51957 841 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 NBPF14Q5TI25 921 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 NBPF10Q6P3W6 841 aaKnown RBP23.26■■□□□ 1.31
SHF-201ENST00000290894 NBPF15Q8N660 670 aa23.26■■□□□ 1.31
SHF-201ENST00000290894 ST18O60284 1047 aa23.25■■□□□ 1.31
SHF-201ENST00000290894 SASH1O94885 1247 aa23.25■■□□□ 1.31
SHF-201ENST00000290894 CCDC8Q9H0W5 538 aaPredicted RBP23.25■■□□□ 1.31
SHF-201ENST00000290894 A1BGP04217 495 aa23.25■■□□□ 1.31
SHF-201ENST00000290894 IFIT2P09913 472 aaKnown RBP23.25■■□□□ 1.31
SHF-201ENST00000290894 ARXQ96QS3 562 aa23.25■■□□□ 1.31
SHF-201ENST00000290894 CWC27Q6UX04 472 aaKnown RBP23.24■■□□□ 1.31
SHF-201ENST00000290894 CARD10Q9BWT7 1032 aa23.24■■□□□ 1.31
SHF-201ENST00000290894 SSFA2P28290 1259 aa23.24■■□□□ 1.31
SHF-201ENST00000290894 G3BP1Q13283 466 aaKnown RBP eCLIP23.24■■□□□ 1.31
SHF-201ENST00000290894 TLR7Q9NYK1 1049 aaKnown RBP23.24■■□□□ 1.31
SHF-201ENST00000290894 HDAC5Q9UQL6 1122 aa23.23■■□□□ 1.31
SHF-201ENST00000290894 RAB3GAP1Q15042 981 aa23.23■■□□□ 1.31
SHF-201ENST00000290894 TTLL7Q6ZT98 887 aa23.23■■□□□ 1.31
SHF-201ENST00000290894 CNTROBQ8N137 903 aa23.23■■□□□ 1.31
SHF-201ENST00000290894 ZGPATQ8N5A5 531 aaKnown RBP23.23■■□□□ 1.31
SHF-201ENST00000290894 EAF2Q96CJ1 260 aaPredicted RBP23.23■■□□□ 1.31
SHF-201ENST00000290894 PARP4Q9UKK3 1724 aaKnown RBP23.23■■□□□ 1.31
SHF-201ENST00000290894 UPF3BQ9BZI7 483 aaKnown RBP23.22■■□□□ 1.31
SHF-201ENST00000290894 BTG4Q9NY30 223 aa23.22■■□□□ 1.31
SHF-201ENST00000290894 ZNF330Q9Y3S2 320 aaPredicted RBP23.22■■□□□ 1.31
SHF-201ENST00000290894 ABCA3Q99758 1704 aa23.22■■□□□ 1.31
SHF-201ENST00000290894 A0A087WZG4 1122 aa23.21■■□□□ 1.31
SHF-201ENST00000290894 PKP1Q13835 747 aa23.21■■□□□ 1.31
SHF-201ENST00000290894 ECHDC1Q9NTX5 307 aa23.21■■□□□ 1.31
SHF-201ENST00000290894 CIZ1Q9ULV3 898 aaPredicted RBP23.21■■□□□ 1.31
SHF-201ENST00000290894 GLRX3O76003 335 aaKnown RBP23.21■■□□□ 1.31
SHF-201ENST00000290894 ERC1Q8IUD2 1116 aa23.2■■□□□ 1.3
SHF-201ENST00000290894 GLI3P10071 1580 aa23.2■■□□□ 1.3
SHF-201ENST00000290894 MCCP23508 829 aa23.2■■□□□ 1.3
SHF-201ENST00000290894 ZBTB3Q9H5J0 574 aa23.2■■□□□ 1.3
SHF-201ENST00000290894 ERVV-2B6SEH9 535 aa23.19■■□□□ 1.3
SHF-201ENST00000290894 TRAK2O60296 914 aa23.19■■□□□ 1.3
SHF-201ENST00000290894 AFDNP55196 1824 aaKnown RBP23.19■■□□□ 1.3
SHF-201ENST00000290894 TTC41PQ6P2S7 1318 aa23.19■■□□□ 1.3
SHF-201ENST00000290894 PLBD2Q8NHP8 589 aa23.18■■□□□ 1.3
SHF-201ENST00000290894 SGSM2O43147 1006 aa23.18■■□□□ 1.3
SHF-201ENST00000290894 CHMP3Q9Y3E7 222 aa23.17■■□□□ 1.3
SHF-201ENST00000290894 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
SHF-201ENST00000290894 USP42Q9H9J4 1324 aaKnown RBP23.16■■□□□ 1.3
SHF-201ENST00000290894 DIAPH3Q9NSV4 1193 aa23.16■■□□□ 1.3
SHF-201ENST00000290894 PLEKHG2Q9H7P9 1386 aa23.16■■□□□ 1.3
SHF-201ENST00000290894 GPATCH3Q96I76 525 aa23.16■■□□□ 1.3
SHF-201ENST00000290894 BOLA2Q9H3K6 86 aa23.16■■□□□ 1.3
SHF-201ENST00000290894 NKX1-1Q15270 411 aaPredicted RBP23.15■■□□□ 1.3
SHF-201ENST00000290894 SHANK3Q9BYB0 1731 aa23.15■■□□□ 1.3
SHF-201ENST00000290894 TMX3Q96JJ7 454 aa23.15■■□□□ 1.3
SHF-201ENST00000290894 TMOD3Q9NYL9 352 aa23.15■■□□□ 1.3
SHF-201ENST00000290894 BRPF3Q9ULD4 1205 aa23.15■■□□□ 1.3
SHF-201ENST00000290894 ASAP1Q9ULH1 1129 aa23.15■■□□□ 1.3
SHF-201ENST00000290894 CCDC9Q9Y3X0 531 aaKnown RBP23.15■■□□□ 1.3
SHF-201ENST00000290894 DDX11L8A8MPP1 907 aa23.14■■□□□ 1.29
SHF-201ENST00000290894 GBP4Q96PP9 640 aa23.14■■□□□ 1.29
SHF-201ENST00000290894 PTPN12Q05209 780 aaKnown RBP23.13■■□□□ 1.29
SHF-201ENST00000290894 LSG1Q9H089 658 aaKnown RBP23.13■■□□□ 1.29
SHF-201ENST00000290894 NDUFB9Q9Y6M9 179 aa23.13■■□□□ 1.29
SHF-201ENST00000290894 KCPQ6ZWJ8 1503 aa23.13■■□□□ 1.29
SHF-201ENST00000290894 HSPA4P34932 840 aa23.13■■□□□ 1.29
SHF-201ENST00000290894 FOXD4L5Q5VV16 416 aaPredicted RBP23.13■■□□□ 1.29
SHF-201ENST00000290894 LMBR1LQ6UX01 489 aa23.13■■□□□ 1.29
SHF-201ENST00000290894 FOXD4L4Q8WXT5 416 aaPredicted RBP23.13■■□□□ 1.29
SHF-201ENST00000290894 EDC3Q96F86 508 aaKnown RBP23.13■■□□□ 1.29
SHF-201ENST00000290894 LAMB4A4D0S4 1761 aa23.13■■□□□ 1.29
SHF-201ENST00000290894 NHSL1Q5SYE7 1610 aa23.13■■□□□ 1.29
SHF-201ENST00000290894 RAD50Q92878 1312 aa23.12■■□□□ 1.29
SHF-201ENST00000290894 TFCP2Q12800 502 aa23.12■■□□□ 1.29
SHF-201ENST00000290894 KIAA1211Q6ZU35 1233 aa23.12■■□□□ 1.29
SHF-201ENST00000290894 RASEFQ8IZ41 740 aa23.12■■□□□ 1.29
SHF-201ENST00000290894 LARP6Q9BRS8 491 aaKnown RBP23.12■■□□□ 1.29
SHF-201ENST00000290894 RFX5P48382 616 aaPredicted RBP23.12■■□□□ 1.29
SHF-201ENST00000290894 FAM227BQ96M60 508 aa23.11■■□□□ 1.29
SHF-201ENST00000290894 CASP7P55210 303 aa23.11■■□□□ 1.29
SHF-201ENST00000290894 ANAPC15P60006 121 aa23.11■■□□□ 1.29
SHF-201ENST00000290894 PTH1RQ03431 593 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms