RNA–Protein interactions for RNA: ENST00000289488.6

LRTOMT-201, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best) BASIC

Gene LRTOMT, Length 2,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-201ENST00000289488 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
LRTOMT-201ENST00000289488 CYP19A1P11511 503 aaPredicted RBP12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 INTS3Q68E01 1043 aaKnown RBP12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 TTLL7Q6ZT98 887 aa12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 VSIG10Q8N0Z9 540 aa12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 SMIM5Q71RC9 77 aa12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 MEIS3Q99687 375 aa12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 ZBTB40Q9NUA8 1239 aa12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
LRTOMT-201ENST00000289488 ARXQ96QS3 562 aa12.1□□□□□ -0.47
LRTOMT-201ENST00000289488 STARD3NLO95772 234 aa12.1□□□□□ -0.47
LRTOMT-201ENST00000289488 IGHDP01880 384 aa12.1□□□□□ -0.47
LRTOMT-201ENST00000289488 CWF19L2Q2TBE0 894 aaKnown RBP12.1□□□□□ -0.47
LRTOMT-201ENST00000289488 DNAAF4Q8WXU2 420 aa12.1□□□□□ -0.47
LRTOMT-201ENST00000289488 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
LRTOMT-201ENST00000289488 KSR2Q6VAB6 950 aa12.09□□□□□ -0.47
LRTOMT-201ENST00000289488 FAM196AQ6ZSG2 479 aa12.09□□□□□ -0.47
LRTOMT-201ENST00000289488 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
LRTOMT-201ENST00000289488 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
LRTOMT-201ENST00000289488 ZBTB3Q9H5J0 574 aa12.09□□□□□ -0.47
LRTOMT-201ENST00000289488 CRKLP46109 303 aaKnown RBP12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 BEND3Q5T5X7 828 aa12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 LINC00116Q8NCU8 138 aa12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 TEX13AQ9BXU3 409 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 BCL11BQ9C0K0 894 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 ARFGEF2Q9Y6D5 1785 aa12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 INTS5Q6P9B9 1019 aaKnown RBP12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-201ENST00000289488 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
LRTOMT-201ENST00000289488 CCT4P50991 539 aaKnown RBP12.07□□□□□ -0.48
LRTOMT-201ENST00000289488 L1TD1Q5T7N2 865 aaKnown RBP12.07□□□□□ -0.48
LRTOMT-201ENST00000289488 USP44Q9H0E7 712 aa12.07□□□□□ -0.48
LRTOMT-201ENST00000289488 COL5A3P25940 1745 aaPredicted RBP12.07□□□□□ -0.48
LRTOMT-201ENST00000289488 IGKV5-2P06315 115 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 NBPF7P0C2Y1 421 aaPredicted RBP12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 LRRC4BQ9NT99 713 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 N4BP2Q86UW6 1770 aaPredicted RBP12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 DDX58O95786 925 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 GLIPR1L2Q4G1C9 344 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 JARID2Q92833 1246 aaPredicted RBP12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 MYD88Q99836 296 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 RRAGDQ9NQL2 400 aaPredicted RBP12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 CCNL1Q9UK58 526 aaPredicted RBP12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 LY75O60449 1722 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 ERBB4Q15303 1308 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 UTRNP46939 3433 aa12.06□□□□□ -0.48
LRTOMT-201ENST00000289488 SIRT2Q8IXJ6 389 aa12.05□□□□□ -0.48
LRTOMT-201ENST00000289488 PKNOX2Q96KN3 472 aa12.05□□□□□ -0.48
LRTOMT-201ENST00000289488 CCDC87Q9NVE4 849 aa12.05□□□□□ -0.48
LRTOMT-201ENST00000289488 NUP188Q5SRE5 1749 aa12.05□□□□□ -0.48
LRTOMT-201ENST00000289488 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
LRTOMT-201ENST00000289488 TAF1LQ8IZX4 1826 aa12.05□□□□□ -0.48
LRTOMT-201ENST00000289488 HLFQ16534 295 aa12.04□□□□□ -0.48
LRTOMT-201ENST00000289488 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
LRTOMT-201ENST00000289488 METTL22Q9BUU2 404 aaPredicted RBP12.04□□□□□ -0.48
LRTOMT-201ENST00000289488 PXDNLA1KZ92 1463 aa12.04□□□□□ -0.48
LRTOMT-201ENST00000289488 RGS3P49796 1198 aa12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 PROM2Q8N271 834 aa12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 LRRFIP2Q9Y608 721 aaKnown RBP12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 NEURL1BA8MQ27 555 aa12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 EIF5P55010 431 aaKnown RBP12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 ATP10DQ9P241 1426 aa12.03□□□□□ -0.48
LRTOMT-201ENST00000289488 NUP98P52948 1817 aa12.02□□□□□ -0.48
LRTOMT-201ENST00000289488 IL6STP40189 918 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 DZIP3Q86Y13 1208 aaKnown RBP12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 CICQ96RK0 1608 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 APBA3O96018 575 aa12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 BECN1Q14457 450 aa12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 C9orf78Q9NZ63 289 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-201ENST00000289488 ZNF831Q5JPB2 1677 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 GNPATO15228 680 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 UBTFL1P0CB47 393 aaPredicted RBP12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 GPTP24298 496 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 GCKRQ14397 625 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 CEP85Q6P2H3 762 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 KIF6Q6ZMV9 814 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 RREB1Q92766 1687 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 MAP3K15Q6ZN16 1313 aa12.01□□□□□ -0.49
LRTOMT-201ENST00000289488 AAMPQ13685 434 aa12□□□□□ -0.49
LRTOMT-201ENST00000289488 COL15A1P39059 1388 aa12□□□□□ -0.49
LRTOMT-201ENST00000289488 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
LRTOMT-201ENST00000289488 GRM8O00222 908 aa12□□□□□ -0.49
LRTOMT-201ENST00000289488 PHF14O94880 888 aa12□□□□□ -0.49
LRTOMT-201ENST00000289488 GNAI2P04899 355 aa12□□□□□ -0.49
LRTOMT-201ENST00000289488 C4BP0C0L5 1744 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 GNAI3P08754 354 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 TXNRD1Q16881 649 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 UBE3BQ7Z3V4 1068 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 KAZALD1Q96I82 304 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 A0A087WZG4 1122 aa11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 GIGYF2Q6Y7W6 1299 aaKnown RBP11.99□□□□□ -0.49
LRTOMT-201ENST00000289488 CHMP4BQ9H444 224 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms