RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 KLHDC4Q8TBB5 520 aa23.58■■□□□ 1.37
BRAF-201ENST00000288602 METTL22Q9BUU2 404 aaPredicted RBP23.58■■□□□ 1.37
BRAF-201ENST00000288602 ANO2Q9NQ90 1003 aa23.58■■□□□ 1.37
BRAF-201ENST00000288602 GCKRQ14397 625 aa23.58■■□□□ 1.37
BRAF-201ENST00000288602 SIL1Q9H173 461 aa23.57■■□□□ 1.36
BRAF-201ENST00000288602 UTYO14607 1347 aa23.57■■□□□ 1.36
BRAF-201ENST00000288602 ATP5J2-PTCD1G3V325 749 aa23.57■■□□□ 1.36
BRAF-201ENST00000288602 PTCD1O75127 700 aaKnown RBP23.57■■□□□ 1.36
BRAF-201ENST00000288602 EPHA10Q5JZY3 1008 aa23.57■■□□□ 1.36
BRAF-201ENST00000288602 AOX1Q06278 1338 aa23.57■■□□□ 1.36
BRAF-201ENST00000288602 CARD10Q9BWT7 1032 aa23.56■■□□□ 1.36
BRAF-201ENST00000288602 MCM4P33991 863 aa23.56■■□□□ 1.36
BRAF-201ENST00000288602 ABCA3Q99758 1704 aa23.55■■□□□ 1.36
BRAF-201ENST00000288602 PARP4Q9UKK3 1724 aaKnown RBP23.55■■□□□ 1.36
BRAF-201ENST00000288602 CLASRPQ8N2M8 674 aaKnown RBP23.55■■□□□ 1.36
BRAF-201ENST00000288602 PALD1Q9ULE6 856 aa23.55■■□□□ 1.36
BRAF-201ENST00000288602 PLEKHG2Q9H7P9 1386 aa23.54■■□□□ 1.36
BRAF-201ENST00000288602 NBPF26B4DH59 902 aa23.54■■□□□ 1.36
BRAF-201ENST00000288602 NBPF14Q5TI25 921 aa23.54■■□□□ 1.36
BRAF-201ENST00000288602 NBPF10Q6P3W6 841 aaKnown RBP23.54■■□□□ 1.36
BRAF-201ENST00000288602 NBPF15Q8N660 670 aa23.54■■□□□ 1.36
BRAF-201ENST00000288602 SASH1O94885 1247 aa23.53■■□□□ 1.36
BRAF-201ENST00000288602 HDAC5Q9UQL6 1122 aa23.53■■□□□ 1.36
BRAF-201ENST00000288602 TNPO1Q92973 898 aaKnown RBP23.53■■□□□ 1.36
BRAF-201ENST00000288602 GLI3P10071 1580 aa23.52■■□□□ 1.36
BRAF-201ENST00000288602 A1BGP04217 495 aa23.52■■□□□ 1.36
BRAF-201ENST00000288602 AACSQ86V21 672 aa23.52■■□□□ 1.36
BRAF-201ENST00000288602 AK9Q5TCS8 1911 aa23.51■■□□□ 1.35
BRAF-201ENST00000288602 ERVV-2B6SEH9 535 aa23.51■■□□□ 1.35
BRAF-201ENST00000288602 UBE3BQ7Z3V4 1068 aa23.51■■□□□ 1.35
BRAF-201ENST00000288602 BTG4Q9NY30 223 aa23.51■■□□□ 1.35
BRAF-201ENST00000288602 IFIT2P09913 472 aaKnown RBP23.51■■□□□ 1.35
BRAF-201ENST00000288602 G3BP1Q13283 466 aaKnown RBP eCLIP23.51■■□□□ 1.35
BRAF-201ENST00000288602 ST18O60284 1047 aa23.5■■□□□ 1.35
BRAF-201ENST00000288602 TTLL7Q6ZT98 887 aa23.5■■□□□ 1.35
BRAF-201ENST00000288602 CNTROBQ8N137 903 aa23.5■■□□□ 1.35
BRAF-201ENST00000288602 CCDC8Q9H0W5 538 aaPredicted RBP23.5■■□□□ 1.35
BRAF-201ENST00000288602 NEK4P51957 841 aa23.49■■□□□ 1.35
BRAF-201ENST00000288602 EAF2Q96CJ1 260 aaPredicted RBP23.49■■□□□ 1.35
BRAF-201ENST00000288602 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
BRAF-201ENST00000288602 ERC1Q8IUD2 1116 aa23.49■■□□□ 1.35
BRAF-201ENST00000288602 TLR7Q9NYK1 1049 aaKnown RBP23.49■■□□□ 1.35
BRAF-201ENST00000288602 A0A087WZG4 1122 aa23.48■■□□□ 1.35
BRAF-201ENST00000288602 RAB3GAP1Q15042 981 aa23.48■■□□□ 1.35
BRAF-201ENST00000288602 CWC27Q6UX04 472 aaKnown RBP23.48■■□□□ 1.35
BRAF-201ENST00000288602 TTC41PQ6P2S7 1318 aa23.48■■□□□ 1.35
BRAF-201ENST00000288602 NHSL1Q5SYE7 1610 aa23.48■■□□□ 1.35
BRAF-201ENST00000288602 GLRX3O76003 335 aaKnown RBP23.48■■□□□ 1.35
BRAF-201ENST00000288602 PLBD2Q8NHP8 589 aa23.48■■□□□ 1.35
BRAF-201ENST00000288602 ECHDC1Q9NTX5 307 aa23.48■■□□□ 1.35
BRAF-201ENST00000288602 CIZ1Q9ULV3 898 aaPredicted RBP23.48■■□□□ 1.35
BRAF-201ENST00000288602 SHANK3Q9BYB0 1731 aa23.47■■□□□ 1.35
BRAF-201ENST00000288602 AFDNP55196 1824 aaKnown RBP23.47■■□□□ 1.35
BRAF-201ENST00000288602 USP42Q9H9J4 1324 aaKnown RBP23.47■■□□□ 1.35
BRAF-201ENST00000288602 ARFGEF2Q9Y6D5 1785 aa23.46■■□□□ 1.35
BRAF-201ENST00000288602 SSFA2P28290 1259 aa23.46■■□□□ 1.35
BRAF-201ENST00000288602 MCCP23508 829 aa23.45■■□□□ 1.35
BRAF-201ENST00000288602 NOL8Q76FK4 1167 aaKnown RBP23.45■■□□□ 1.35
BRAF-201ENST00000288602 ZGPATQ8N5A5 531 aaKnown RBP23.45■■□□□ 1.35
BRAF-201ENST00000288602 GZF1Q9H116 711 aaPredicted RBP23.45■■□□□ 1.35
BRAF-201ENST00000288602 ZBTB3Q9H5J0 574 aa23.45■■□□□ 1.35
BRAF-201ENST00000288602 LAMB4A4D0S4 1761 aa23.45■■□□□ 1.34
BRAF-201ENST00000288602 SGSM2O43147 1006 aa23.44■■□□□ 1.34
BRAF-201ENST00000288602 KCPQ6ZWJ8 1503 aa23.44■■□□□ 1.34
BRAF-201ENST00000288602 UPF3BQ9BZI7 483 aaKnown RBP23.44■■□□□ 1.34
BRAF-201ENST00000288602 ZNF330Q9Y3S2 320 aaPredicted RBP23.44■■□□□ 1.34
BRAF-201ENST00000288602 TMOD3Q9NYL9 352 aa23.43■■□□□ 1.34
BRAF-201ENST00000288602 PKP1Q13835 747 aa23.42■■□□□ 1.34
BRAF-201ENST00000288602 GPATCH3Q96I76 525 aa23.42■■□□□ 1.34
BRAF-201ENST00000288602 UBR2Q8IWV8 1755 aa23.42■■□□□ 1.34
BRAF-201ENST00000288602 ASAP1Q9ULH1 1129 aa23.42■■□□□ 1.34
BRAF-201ENST00000288602 TRAK2O60296 914 aa23.41■■□□□ 1.34
BRAF-201ENST00000288602 PTPN12Q05209 780 aaKnown RBP23.41■■□□□ 1.34
BRAF-201ENST00000288602 RFX5P48382 616 aaPredicted RBP23.41■■□□□ 1.34
BRAF-201ENST00000288602 BOLA2Q9H3K6 86 aa23.41■■□□□ 1.34
BRAF-201ENST00000288602 CHMP3Q9Y3E7 222 aa23.41■■□□□ 1.34
BRAF-201ENST00000288602 KAT6BQ8WYB5 2073 aa23.41■■□□□ 1.34
BRAF-201ENST00000288602 CASP7P55210 303 aa23.4■■□□□ 1.34
BRAF-201ENST00000288602 DIAPH3Q9NSV4 1193 aa23.4■■□□□ 1.34
BRAF-201ENST00000288602 HSPA4P34932 840 aa23.4■■□□□ 1.34
BRAF-201ENST00000288602 PIGBQ92521 554 aa23.4■■□□□ 1.34
BRAF-201ENST00000288602 LSG1Q9H089 658 aaKnown RBP23.4■■□□□ 1.34
BRAF-201ENST00000288602 TOGARAM1Q9Y4F4 1720 aa23.4■■□□□ 1.34
BRAF-201ENST00000288602 LMBR1LQ6UX01 489 aa23.39■■□□□ 1.34
BRAF-201ENST00000288602 ANAPC15P60006 121 aa23.39■■□□□ 1.33
BRAF-201ENST00000288602 TMX3Q96JJ7 454 aa23.39■■□□□ 1.33
BRAF-201ENST00000288602 TFCP2Q12800 502 aa23.38■■□□□ 1.33
BRAF-201ENST00000288602 ERBB4Q15303 1308 aa23.38■■□□□ 1.33
BRAF-201ENST00000288602 COPRSQ9NQ92 184 aa23.38■■□□□ 1.33
BRAF-201ENST00000288602 RAD50Q92878 1312 aa23.38■■□□□ 1.33
BRAF-201ENST00000288602 RABL6Q3YEC7 729 aaPredicted RBP23.38■■□□□ 1.33
BRAF-201ENST00000288602 GBP4Q96PP9 640 aa23.38■■□□□ 1.33
BRAF-201ENST00000288602 ARXQ96QS3 562 aa23.38■■□□□ 1.33
BRAF-201ENST00000288602 DDX11L8A8MPP1 907 aa23.37■■□□□ 1.33
BRAF-201ENST00000288602 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
BRAF-201ENST00000288602 KIAA1211Q6ZU35 1233 aa23.37■■□□□ 1.33
BRAF-201ENST00000288602 RASEFQ8IZ41 740 aa23.37■■□□□ 1.33
BRAF-201ENST00000288602 EVI5LQ96CN4 794 aa23.37■■□□□ 1.33
BRAF-201ENST00000288602 PTH1RQ03431 593 aa23.36■■□□□ 1.33
BRAF-201ENST00000288602 CWC25Q9NXE8 425 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms