RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 C1orf167Q5SNV9 1468 aa11.27□□□□□ -0.6
CSF1R-201ENST00000286301 CYP27B1O15528 508 aa11.27□□□□□ -0.61
CSF1R-201ENST00000286301 GLRX3O76003 335 aaKnown RBP11.27□□□□□ -0.61
CSF1R-201ENST00000286301 BABAM1Q9NWV8 329 aa11.27□□□□□ -0.61
CSF1R-201ENST00000286301 DDX11L8A8MPP1 907 aa11.27□□□□□ -0.61
CSF1R-201ENST00000286301 NDUFB9Q9Y6M9 179 aa11.27□□□□□ -0.61
CSF1R-201ENST00000286301 MAPK8IP2Q13387 824 aaPredicted RBP11.26□□□□□ -0.61
CSF1R-201ENST00000286301 LMBR1LQ6UX01 489 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 GRPEL1Q9HAV7 217 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 KIF24Q5T7B8 1368 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 SSFA2P28290 1259 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 UNC5CLQ8IV45 518 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 EXOC5O00471 708 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 ECHDC1Q9NTX5 307 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 ALDH1L1O75891 902 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 CD2BP2O95400 341 aaKnown RBP11.26□□□□□ -0.61
CSF1R-201ENST00000286301 ESYT1Q9BSJ8 1104 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 USP26Q9BXU7 913 aa11.26□□□□□ -0.61
CSF1R-201ENST00000286301 SSH2Q76I76 1423 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 HOXB7P09629 217 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 CLCN1P35523 988 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSF1R-201ENST00000286301 PRPF40BQ6NWY9 871 aaKnown RBP11.25□□□□□ -0.61
CSF1R-201ENST00000286301 FOSBP53539 338 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 SPATA31A3Q5VYP0 1347 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 PDE4CQ08493 712 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
CSF1R-201ENST00000286301 TNPO1Q92973 898 aaKnown RBP11.25□□□□□ -0.61
CSF1R-201ENST00000286301 R3HCC1Q9Y3T6 440 aaKnown RBP11.25□□□□□ -0.61
CSF1R-201ENST00000286301 RGPD8O14715 1765 aaPredicted RBP11.24□□□□□ -0.61
CSF1R-201ENST00000286301 STARD3NLO95772 234 aa11.24□□□□□ -0.61
CSF1R-201ENST00000286301 CHMLP26374 656 aa11.24□□□□□ -0.61
CSF1R-201ENST00000286301 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
CSF1R-201ENST00000286301 TTLL7Q6ZT98 887 aa11.24□□□□□ -0.61
CSF1R-201ENST00000286301 JAKMIP1Q96N16 626 aaKnown RBP11.24□□□□□ -0.61
CSF1R-201ENST00000286301 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
CSF1R-201ENST00000286301 SNRKQ9NRH2 765 aa11.24□□□□□ -0.61
CSF1R-201ENST00000286301 VPS37CA5D8V6 355 aaPredicted RBP11.23□□□□□ -0.61
CSF1R-201ENST00000286301 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
CSF1R-201ENST00000286301 STK3Q13188 491 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 SSH3Q8TE77 659 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 TBC1D2BQ9UPU7 963 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 CNNM1Q9NRU3 951 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 PCDH11XQ9BZA7 1347 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 PCDH11YQ9BZA8 1340 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 CPA1P15085 419 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
CSF1R-201ENST00000286301 DDX46Q7L014 1031 aaKnown RBP11.23□□□□□ -0.61
CSF1R-201ENST00000286301 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
CSF1R-201ENST00000286301 EDC3Q96F86 508 aaKnown RBP11.23□□□□□ -0.61
CSF1R-201ENST00000286301 CWC25Q9NXE8 425 aaPredicted RBP11.23□□□□□ -0.61
CSF1R-201ENST00000286301 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
CSF1R-201ENST00000286301 NUCB2P80303 420 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 GCKRQ14397 625 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 APPP05067 770 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 METTL22Q9BUU2 404 aaPredicted RBP11.22□□□□□ -0.61
CSF1R-201ENST00000286301 CEP126Q9P2H0 1117 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 FAM89AQ96GI7 184 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 ZNF594Q96JF6 807 aaPredicted RBP11.22□□□□□ -0.61
CSF1R-201ENST00000286301 SMC3Q9UQE7 1217 aa11.22□□□□□ -0.61
CSF1R-201ENST00000286301 NEURL1BA8MQ27 555 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 TOMM22Q9NS69 142 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 ASAP1Q9ULH1 1129 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 ANKRD26Q9UPS8 1709 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 TPM2P07951 284 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 TFCP2Q12800 502 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 NGLY1Q96IV0 654 aa11.21□□□□□ -0.61
CSF1R-201ENST00000286301 NRKQ7Z2Y5 1582 aa11.21□□□□□ -0.62
CSF1R-201ENST00000286301 GOLGA6L4A6NEF3 574 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 TIMM10P62072 90 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 RNF20Q5VTR2 975 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 CAVIN1Q6NZI2 390 aaKnown RBP11.2□□□□□ -0.62
CSF1R-201ENST00000286301 TRMT112Q9UI30 125 aaKnown RBP11.2□□□□□ -0.62
CSF1R-201ENST00000286301 LMTK3Q96Q04 1460 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 IBTKQ9P2D0 1353 aaPredicted RBP11.2□□□□□ -0.62
CSF1R-201ENST00000286301 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 MEX3CQ5U5Q3 659 aaKnown RBP11.2□□□□□ -0.62
CSF1R-201ENST00000286301 PALD1Q9ULE6 856 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.2□□□□□ -0.62
CSF1R-201ENST00000286301 GOLIM4O00461 696 aa11.2□□□□□ -0.62
CSF1R-201ENST00000286301 KDM4AO75164 1064 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 NASPP49321 788 aaPredicted RBP11.19□□□□□ -0.62
CSF1R-201ENST00000286301 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
CSF1R-201ENST00000286301 STK11IPQ8N1F8 1099 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 EAF2Q96CJ1 260 aaPredicted RBP11.19□□□□□ -0.62
CSF1R-201ENST00000286301 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 PDCL3Q9H2J4 239 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 TTC39AQ5SRH9 613 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 C8orf37Q96NL8 207 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
CSF1R-201ENST00000286301 CYP46A1Q9Y6A2 500 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 MON2Q7Z3U7 1717 aa11.19□□□□□ -0.62
CSF1R-201ENST00000286301 IGKV5-2P06315 115 aa11.18□□□□□ -0.62
CSF1R-201ENST00000286301 SNX21Q969T3 373 aa11.18□□□□□ -0.62
CSF1R-201ENST00000286301 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms