RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 PLCH1Q4KWH8 1693 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 NEURL1BA8MQ27 555 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 GRM8O00222 908 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 RXRBP28702 533 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 DZIP3Q86Y13 1208 aaKnown RBP12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 CCDC24Q8N4L8 307 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 ANKRD44Q8N8A2 993 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 FAM89AQ96GI7 184 aa12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 CCNL1Q9UK58 526 aaPredicted RBP12.23□□□□□ -0.45
PPP4R1-201ENST00000285124 SRCAPQ6ZRS2 3230 aa12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 PLBD2Q8NHP8 589 aa12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 OTUD7AQ8TE49 926 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 HDAC1Q13547 482 aaPredicted RBP12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 GCKRQ14397 625 aa12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 POTEAQ6S8J7 498 aa12.22□□□□□ -0.45
PPP4R1-201ENST00000285124 EPHA10Q5JZY3 1008 aa12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 ZNF772Q68DY9 489 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 LRRC37A3O60309 1634 aa12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 PDE4AP27815 886 aa12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 CHD1LQ86WJ1 897 aa12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 RPAP2Q8IXW5 612 aaPredicted RBP12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
PPP4R1-201ENST00000285124 GNPATO15228 680 aa12.21□□□□□ -0.46
PPP4R1-201ENST00000285124 HMMRO75330 724 aa12.21□□□□□ -0.46
PPP4R1-201ENST00000285124 RBM6P78332 1123 aaKnown RBP12.21□□□□□ -0.46
PPP4R1-201ENST00000285124 CCDC87Q9NVE4 849 aa12.21□□□□□ -0.46
PPP4R1-201ENST00000285124 PARP4Q9UKK3 1724 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 MSH5O43196 834 aa12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 AAMPQ13685 434 aa12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 INTS5Q6P9B9 1019 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 RBM19Q9Y4C8 960 aaKnown RBP12.2□□□□□ -0.46
PPP4R1-201ENST00000285124 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
PPP4R1-201ENST00000285124 FBXO41Q8TF61 875 aa12.19□□□□□ -0.46
PPP4R1-201ENST00000285124 SMC5Q8IY18 1101 aa12.19□□□□□ -0.46
PPP4R1-201ENST00000285124 SRP68Q9UHB9 627 aaKnown RBP12.19□□□□□ -0.46
PPP4R1-201ENST00000285124 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 CWC25Q9NXE8 425 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 PKD1L3Q7Z443 1732 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 NPHP1O15259 732 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 APBA3O96018 575 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 LMBR1LQ6UX01 489 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 DCTPP1Q9H773 170 aa12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
PPP4R1-201ENST00000285124 KAZALD1Q96I82 304 aa12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 NUCB1Q02818 461 aa12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 GCC1Q96CN9 775 aa12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 ZNF594Q96JF6 807 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 ONECUT3O60422 494 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 HCLS1P14317 486 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 GTF2E1P29083 439 aaPredicted RBP12.17□□□□□ -0.46
PPP4R1-201ENST00000285124 NIP7Q9Y221 180 aaKnown RBP eCLIP12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 MAP3K15Q6ZN16 1313 aa12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 ATRNO75882 1429 aa12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 MRC1P22897 1456 aa12.16□□□□□ -0.46
PPP4R1-201ENST00000285124 GIGYF2Q6Y7W6 1299 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-201ENST00000285124 IL6STP40189 918 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-201ENST00000285124 EIF5P55010 431 aaKnown RBP12.15□□□□□ -0.46
PPP4R1-201ENST00000285124 NRAPQ86VF7 1730 aa12.15□□□□□ -0.47
PPP4R1-201ENST00000285124 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 USPL1Q5W0Q7 1092 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 AK7Q96M32 723 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 TOGARAM1Q9Y4F4 1720 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 ATP10DQ9P241 1426 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 G3BP1Q13283 466 aaKnown RBP eCLIP12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 BCL11BQ9C0K0 894 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 RTCBQ9Y3I0 505 aaKnown RBP12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 ERBB4Q15303 1308 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 CCDC8Q9H0W5 538 aaPredicted RBP12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 GLI3P10071 1580 aa12.14□□□□□ -0.47
PPP4R1-201ENST00000285124 PLEKHG2Q9H7P9 1386 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 SHANK3Q9BYB0 1731 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 ZPR1O75312 459 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 SEC24BO95487 1268 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 TAF7LQ5H9L4 462 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 C5P01031 1676 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 NLRP10Q86W26 655 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 CCDC191Q8NCU4 936 aa12.13□□□□□ -0.47
PPP4R1-201ENST00000285124 RFC4P35249 363 aa12.12□□□□□ -0.47
PPP4R1-201ENST00000285124 SSH3Q8TE77 659 aa12.12□□□□□ -0.47
PPP4R1-201ENST00000285124 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
PPP4R1-201ENST00000285124 RHPN1Q8TCX5 695 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms