RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ROBO1Q9Y6N7 1651 aa22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 SSH3Q8TE77 659 aa22.35■■□□□ 1.17
PDLIM3-201ENST00000284767 BAG4O95429 457 aaKnown RBP22.34■■□□□ 1.17
PDLIM3-201ENST00000284767 SDSP20132 328 aa22.34■■□□□ 1.17
PDLIM3-201ENST00000284767 C9orf78Q9NZ63 289 aaPredicted RBP22.34■■□□□ 1.17
PDLIM3-201ENST00000284767 PDE1AP54750 535 aa22.33■■□□□ 1.17
PDLIM3-201ENST00000284767 RIC3Q7Z5B4 369 aa22.33■■□□□ 1.17
PDLIM3-201ENST00000284767 SURF6O75683 361 aaKnown RBP22.33■■□□□ 1.16
PDLIM3-201ENST00000284767 NASPP49321 788 aaPredicted RBP22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 NUCB2P80303 420 aa22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 LRP10Q7Z4F1 713 aa22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 DDX49Q9Y6V7 483 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 PTCD1O75127 700 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 IGKV5-2P06315 115 aa22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 POLA2Q14181 598 aa22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 ANP32BQ92688 251 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-201ENST00000284767 PLEKHG2Q9H7P9 1386 aa22.31■■□□□ 1.16
PDLIM3-201ENST00000284767 DDX58O95786 925 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-201ENST00000284767 HSP90AA2PQ14568 343 aaPredicted RBP22.31■■□□□ 1.16
PDLIM3-201ENST00000284767 SHANK3Q9BYB0 1731 aa22.3■■□□□ 1.16
PDLIM3-201ENST00000284767 SALL3Q9BXA9 1300 aa22.3■■□□□ 1.16
PDLIM3-201ENST00000284767 ALDH1L1O75891 902 aa22.3■■□□□ 1.16
PDLIM3-201ENST00000284767 LINS1Q8NG48 757 aa22.3■■□□□ 1.16
PDLIM3-201ENST00000284767 JARID2Q92833 1246 aaPredicted RBP22.3■■□□□ 1.16
PDLIM3-201ENST00000284767 GLI3P10071 1580 aa22.29■■□□□ 1.16
PDLIM3-201ENST00000284767 ZNF445P59923 1031 aa22.29■■□□□ 1.16
PDLIM3-201ENST00000284767 MYD88Q99836 296 aa22.29■■□□□ 1.16
PDLIM3-201ENST00000284767 TPM2P07951 284 aa22.28■■□□□ 1.16
PDLIM3-201ENST00000284767 NUTM1Q86Y26 1132 aa22.28■■□□□ 1.16
PDLIM3-201ENST00000284767 KAZALD1Q96I82 304 aa22.28■■□□□ 1.16
PDLIM3-201ENST00000284767 SUCLG2Q96I99 432 aa22.28■■□□□ 1.16
PDLIM3-201ENST00000284767 MX1P20591 662 aa22.28■■□□□ 1.16
PDLIM3-201ENST00000284767 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
PDLIM3-201ENST00000284767 GRM8O00222 908 aa22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 CYP2E1P05181 493 aaPredicted RBP22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 PA2G4Q9UQ80 394 aaKnown RBP22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 ERVV-2B6SEH9 535 aa22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 ANKRD13DQ6ZTN6 518 aa22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 CWC22Q9HCG8 908 aaKnown RBP22.27■■□□□ 1.16
PDLIM3-201ENST00000284767 NBPF26B4DH59 902 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 NBPF10Q6P3W6 841 aaKnown RBP22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 ZSCAN30Q86W11 494 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 NBPF15Q8N660 670 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 OSBPL3Q9H4L5 887 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 AK9Q5TCS8 1911 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 RHPN1Q8TCX5 695 aa22.26■■□□□ 1.15
PDLIM3-201ENST00000284767 NEURL1BA8MQ27 555 aa22.25■■□□□ 1.15
PDLIM3-201ENST00000284767 ADAMTS2O95450 1211 aa22.25■■□□□ 1.15
PDLIM3-201ENST00000284767 A1BGP04217 495 aa22.25■■□□□ 1.15
PDLIM3-201ENST00000284767 BICC1Q9H694 974 aaKnown RBP22.25■■□□□ 1.15
PDLIM3-201ENST00000284767 LTBP4Q8N2S1 1624 aa22.25■■□□□ 1.15
PDLIM3-201ENST00000284767 ATP5J2-PTCD1G3V325 749 aa22.24■■□□□ 1.15
PDLIM3-201ENST00000284767 CASC1Q6TDU7 716 aa22.24■■□□□ 1.15
PDLIM3-201ENST00000284767 METTL22Q9BUU2 404 aaPredicted RBP22.24■■□□□ 1.15
PDLIM3-201ENST00000284767 TOGARAM1Q9Y4F4 1720 aa22.23■■□□□ 1.15
PDLIM3-201ENST00000284767 NEXNQ0ZGT2 675 aa22.23■■□□□ 1.15
PDLIM3-201ENST00000284767 MCTP1Q6DN14 999 aa22.23■■□□□ 1.15
PDLIM3-201ENST00000284767 UNC5CLQ8IV45 518 aa22.23■■□□□ 1.15
PDLIM3-201ENST00000284767 GCKRQ14397 625 aa22.22■■□□□ 1.15
PDLIM3-201ENST00000284767 HS1BP3Q53T59 392 aa22.22■■□□□ 1.15
PDLIM3-201ENST00000284767 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
PDLIM3-201ENST00000284767 PIP4K2BP78356 416 aa22.22■■□□□ 1.15
PDLIM3-201ENST00000284767 LMBRD1Q9NUN5 540 aa22.22■■□□□ 1.15
PDLIM3-201ENST00000284767 COL16A1Q07092 1604 aaPredicted RBP22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 ST18O60284 1047 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 OS9Q13438 667 aaPredicted RBP22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 MTX1Q13505 466 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 EPHA10Q5JZY3 1008 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 TTLL7Q6ZT98 887 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 ASAP1Q9ULH1 1129 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 MAP4K4O95819 1239 aaPredicted RBP22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 KLHDC4Q8TBB5 520 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 RILPL2Q969X0 211 aa22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.21■■□□□ 1.15
PDLIM3-201ENST00000284767 KAT6BQ8WYB5 2073 aa22.2■■□□□ 1.15
PDLIM3-201ENST00000284767 UTYO14607 1347 aa22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 AHDC1Q5TGY3 1603 aaPredicted RBP22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 TRIM6-TRIM34B2RNG4 842 aa22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 RAB11FIP3O75154 756 aa22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 TMOD3Q9NYL9 352 aa22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 ZSCAN23Q3MJ62 389 aa22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 KIF1BPQ96EK5 621 aa22.2■■□□□ 1.14
PDLIM3-201ENST00000284767 PIGBQ92521 554 aa22.19■■□□□ 1.14
PDLIM3-201ENST00000284767 MSNP26038 577 aaKnown RBP22.19■■□□□ 1.14
PDLIM3-201ENST00000284767 UBR2Q8IWV8 1755 aa22.19■■□□□ 1.14
PDLIM3-201ENST00000284767 NUTM2BA6NNL0 878 aaPredicted RBP22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 NUTM2EB1AL46 878 aaPredicted RBP22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 CAVIN1Q6NZI2 390 aaKnown RBP22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 NUTM2AQ8IVF1 878 aaPredicted RBP22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 STAP2Q9UGK3 403 aa22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 LAMB4A4D0S4 1761 aa22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 REC8O95072 547 aa22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 SIL1Q9H173 461 aa22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 COL14A1Q05707 1796 aaKnown RBP22.18■■□□□ 1.14
PDLIM3-201ENST00000284767 OFD1O75665 1012 aa22.17■■□□□ 1.14
PDLIM3-201ENST00000284767 UBE3BQ7Z3V4 1068 aa22.17■■□□□ 1.14
PDLIM3-201ENST00000284767 ZNF330Q9Y3S2 320 aaPredicted RBP22.17■■□□□ 1.14
PDLIM3-201ENST00000284767 ZBTB3Q9H5J0 574 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms