RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
TRIM23-202ENST00000274327 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
TRIM23-202ENST00000274327 MYD88Q99836 296 aa18.13■□□□□ 0.49
TRIM23-202ENST00000274327 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
TRIM23-202ENST00000274327 TTLL7Q6ZT98 887 aa18.12■□□□□ 0.49
TRIM23-202ENST00000274327 LNPKQ9C0E8 428 aa18.12■□□□□ 0.49
TRIM23-202ENST00000274327 PNMA6EA0A0J9YXQ4 647 aa18.12■□□□□ 0.49
TRIM23-202ENST00000274327 CYP19A1P11511 503 aaPredicted RBP18.12■□□□□ 0.49
TRIM23-202ENST00000274327 FAM161AQ3B820 660 aa18.12■□□□□ 0.49
TRIM23-202ENST00000274327 RREB1Q92766 1687 aa18.11■□□□□ 0.49
TRIM23-202ENST00000274327 GRM8O00222 908 aa18.11■□□□□ 0.49
TRIM23-202ENST00000274327 C8orf34Q49A92 452 aa18.11■□□□□ 0.49
TRIM23-202ENST00000274327 SSH3Q8TE77 659 aa18.11■□□□□ 0.49
TRIM23-202ENST00000274327 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
TRIM23-202ENST00000274327 HDAC5Q9UQL6 1122 aa18.11■□□□□ 0.49
TRIM23-202ENST00000274327 NHSQ6T4R5 1651 aa18.11■□□□□ 0.49
TRIM23-202ENST00000274327 POLA2Q14181 598 aa18.1■□□□□ 0.49
TRIM23-202ENST00000274327 GCKRQ14397 625 aa18.1■□□□□ 0.49
TRIM23-202ENST00000274327 KCNQ2O43526 872 aa18.09■□□□□ 0.49
TRIM23-202ENST00000274327 MTX1Q13505 466 aa18.09■□□□□ 0.49
TRIM23-202ENST00000274327 A0A0G2JS52 829 aa18.09■□□□□ 0.49
TRIM23-202ENST00000274327 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
TRIM23-202ENST00000274327 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
TRIM23-202ENST00000274327 PPP1R42Q7Z4L9 355 aa18.08■□□□□ 0.48
TRIM23-202ENST00000274327 SBF2Q86WG5 1849 aa18.08■□□□□ 0.48
TRIM23-202ENST00000274327 COL5A3P25940 1745 aaPredicted RBP18.07■□□□□ 0.48
TRIM23-202ENST00000274327 BTAF1O14981 1849 aa18.07■□□□□ 0.48
TRIM23-202ENST00000274327 COL15A1P39059 1388 aa18.07■□□□□ 0.48
TRIM23-202ENST00000274327 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
TRIM23-202ENST00000274327 SIK1P57059 783 aa18.07■□□□□ 0.48
TRIM23-202ENST00000274327 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
TRIM23-202ENST00000274327 SUCLG2Q96I99 432 aa18.07■□□□□ 0.48
TRIM23-202ENST00000274327 QTRT2Q9H974 415 aaKnown RBP18.06■□□□□ 0.48
TRIM23-202ENST00000274327 ZBTB1Q9Y2K1 713 aa18.06■□□□□ 0.48
TRIM23-202ENST00000274327 ERICH6Q7L0X2 663 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 ZBTB3Q9H5J0 574 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 ATP5J2-PTCD1G3V325 749 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 MSH5O43196 834 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 ATP6V1AP38606 617 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 IL6STP40189 918 aaPredicted RBP18.05■□□□□ 0.48
TRIM23-202ENST00000274327 CASP7P55210 303 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 EXOC6BQ9Y2D4 811 aa18.05■□□□□ 0.48
TRIM23-202ENST00000274327 MYH14Q7Z406 1995 aaKnown RBP18.05■□□□□ 0.48
TRIM23-202ENST00000274327 ANKRD36CQ5JPF3 1778 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 SRGAP3O43295 1099 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 ITPK1Q13572 414 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 KIF6Q6ZMV9 814 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 SEPT12Q8IYM1 358 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 ISCA1Q9BUE6 129 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 MAP3K15Q6ZN16 1313 aa18.04■□□□□ 0.48
TRIM23-202ENST00000274327 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
TRIM23-202ENST00000274327 H7C1W4 665 aa18.02■□□□□ 0.48
TRIM23-202ENST00000274327 SMARCA5O60264 1052 aaPredicted RBP18.02■□□□□ 0.48
TRIM23-202ENST00000274327 TCIRG1Q13488 830 aa18.02■□□□□ 0.48
TRIM23-202ENST00000274327 PLEKHM2Q8IWE5 1019 aa18.02■□□□□ 0.48
TRIM23-202ENST00000274327 CCDC191Q8NCU4 936 aa18.02■□□□□ 0.48
TRIM23-202ENST00000274327 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.48
TRIM23-202ENST00000274327 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
TRIM23-202ENST00000274327 NOP58Q9Y2X3 529 aaKnown RBP18.02■□□□□ 0.48
TRIM23-202ENST00000274327 NUP98P52948 1817 aa18.02■□□□□ 0.48
TRIM23-202ENST00000274327 TRIM28Q13263 835 aaKnown RBP18.02■□□□□ 0.47
TRIM23-202ENST00000274327 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.47
TRIM23-202ENST00000274327 CWC25Q9NXE8 425 aaPredicted RBP18.02■□□□□ 0.47
TRIM23-202ENST00000274327 A0A087WZG4 1122 aa18.01■□□□□ 0.47
TRIM23-202ENST00000274327 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
TRIM23-202ENST00000274327 EIF5P55010 431 aaKnown RBP18.01■□□□□ 0.47
TRIM23-202ENST00000274327 PTF1AQ7RTS3 328 aa18.01■□□□□ 0.47
TRIM23-202ENST00000274327 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
TRIM23-202ENST00000274327 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
TRIM23-202ENST00000274327 ZNF330Q9Y3S2 320 aaPredicted RBP18.01■□□□□ 0.47
TRIM23-202ENST00000274327 BRWD3Q6RI45 1802 aa18.01■□□□□ 0.47
TRIM23-202ENST00000274327 LY75O60449 1722 aa18.01■□□□□ 0.47
TRIM23-202ENST00000274327 APBB1O00213 710 aa18■□□□□ 0.47
TRIM23-202ENST00000274327 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
TRIM23-202ENST00000274327 EPHA10Q5JZY3 1008 aa18■□□□□ 0.47
TRIM23-202ENST00000274327 GIGYF2Q6Y7W6 1299 aaKnown RBP18■□□□□ 0.47
TRIM23-202ENST00000274327 SURF6O75683 361 aaKnown RBP18■□□□□ 0.47
TRIM23-202ENST00000274327 RABL6Q3YEC7 729 aaPredicted RBP18■□□□□ 0.47
TRIM23-202ENST00000274327 BMP2KLQ5H9B9 411 aa18■□□□□ 0.47
TRIM23-202ENST00000274327 UBE3BQ7Z3V4 1068 aa18■□□□□ 0.47
TRIM23-202ENST00000274327 ERVV-1B6SEH8 477 aa17.99■□□□□ 0.47
TRIM23-202ENST00000274327 FAM182BQ5T319 152 aa17.99■□□□□ 0.47
TRIM23-202ENST00000274327 SALL3Q9BXA9 1300 aa17.98■□□□□ 0.47
TRIM23-202ENST00000274327 HSP90AB4PQ58FF6 505 aa17.98■□□□□ 0.47
TRIM23-202ENST00000274327 OTUD7AQ8TE49 926 aaPredicted RBP17.98■□□□□ 0.47
TRIM23-202ENST00000274327 HLFQ16534 295 aa17.98■□□□□ 0.47
TRIM23-202ENST00000274327 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
TRIM23-202ENST00000274327 JARID2Q92833 1246 aaPredicted RBP17.98■□□□□ 0.47
TRIM23-202ENST00000274327 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
TRIM23-202ENST00000274327 LINC00116Q8NCU8 138 aa17.97■□□□□ 0.47
TRIM23-202ENST00000274327 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
TRIM23-202ENST00000274327 ZNF772Q68DY9 489 aaPredicted RBP17.96■□□□□ 0.47
TRIM23-202ENST00000274327 RHPN1Q8TCX5 695 aa17.96■□□□□ 0.47
TRIM23-202ENST00000274327 KIF1BPQ96EK5 621 aa17.96■□□□□ 0.47
TRIM23-202ENST00000274327 TAF1LQ8IZX4 1826 aa17.96■□□□□ 0.47
TRIM23-202ENST00000274327 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
TRIM23-202ENST00000274327 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.47
TRIM23-202ENST00000274327 BCORQ6W2J9 1755 aa17.96■□□□□ 0.46
TRIM23-202ENST00000274327 TTC22Q5TAA0 569 aa17.95■□□□□ 0.46
TRIM23-202ENST00000274327 GSPT1P15170 499 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms