RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 SSRP1Q08945 709 aaKnown RBP15.48■□□□□ 0.07
SMG9-201ENST00000270066 IFIT3O14879 490 aaKnown RBP15.47■□□□□ 0.07
SMG9-201ENST00000270066 GSTO1P78417 241 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 NBPF6Q5VWK0 638 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 NBPF5PQ86XG9 351 aaPredicted RBP15.47■□□□□ 0.07
SMG9-201ENST00000270066 NBPF4Q96M43 638 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 GOLGA8AA7E2F4 631 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 GOLGA8BA8MQT2 603 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 PPP1R12BO60237 982 aaPredicted RBP15.47■□□□□ 0.07
SMG9-201ENST00000270066 SCAND2PQ9GZW5 306 aaPredicted RBP15.47■□□□□ 0.07
SMG9-201ENST00000270066 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 ABCC1P33527 1531 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 FLT4P35916 1363 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 DESP17661 470 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 MAP3K11Q16584 847 aa15.47■□□□□ 0.07
SMG9-201ENST00000270066 GOLIM4O00461 696 aa15.46■□□□□ 0.07
SMG9-201ENST00000270066 CWC15Q9P013 229 aaKnown RBP15.46■□□□□ 0.07
SMG9-201ENST00000270066 ABCC2Q92887 1545 aa15.46■□□□□ 0.07
SMG9-201ENST00000270066 LIMCH1Q9UPQ0 1083 aa15.46■□□□□ 0.07
SMG9-201ENST00000270066 PTPRKQ15262 1439 aa15.46■□□□□ 0.07
SMG9-201ENST00000270066 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.06
SMG9-201ENST00000270066 TRIM21P19474 475 aaKnown RBP15.46■□□□□ 0.06
SMG9-201ENST00000270066 TMEM266Q2M3C6 531 aa15.46■□□□□ 0.06
SMG9-201ENST00000270066 PDE4BQ07343 736 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 PPP4R3AQ6IN85 833 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 ALDH1L1O75891 902 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 CCDC12Q8WUD4 166 aaPredicted RBP15.45■□□□□ 0.06
SMG9-201ENST00000270066 ZSCAN30Q86W11 494 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 KIF5BP33176 963 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 DNAI2Q9GZS0 605 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 ZNF219Q9P2Y4 722 aaPredicted RBP15.45■□□□□ 0.06
SMG9-201ENST00000270066 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 CCDC181Q5TID7 509 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
SMG9-201ENST00000270066 ZFYVE9O95405 1425 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 NPATQ14207 1427 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 DDB1Q16531 1140 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 CHPF2Q9P2E5 772 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 IL2RBP14784 551 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 SKIDA1Q1XH10 827 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 ZMYND15Q9H091 742 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 TTLL12Q14166 644 aaPredicted RBP15.44■□□□□ 0.06
SMG9-201ENST00000270066 ZNF622Q969S3 477 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■□□□ 14.5
SMG9-201ENST00000270066 EIF4A2Q14240 407 aaKnown RBP15.44■□□□□ 0.06
SMG9-201ENST00000270066 BMP2KLQ5H9B9 411 aa15.44■□□□□ 0.06
SMG9-201ENST00000270066 CCDC194A0A1B0GVG4 234 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 TSG101Q99816 390 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 CABP5Q9NP86 173 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 ZMYM3Q14202 1370 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 EIF5P55010 431 aaKnown RBP15.43■□□□□ 0.06
SMG9-201ENST00000270066 ANKRD18AQ8IVF6 992 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 XAGE3Q8WTP9 111 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 NLRP5P59047 1200 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 ERICH4A6NGS2 130 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
SMG9-201ENST00000270066 ZGPATQ8N5A5 531 aaKnown RBP15.43■□□□□ 0.06
SMG9-201ENST00000270066 CRNKL1Q9BZJ0 848 aaKnown RBP15.43■□□□□ 0.06
SMG9-201ENST00000270066 H0YHG0 523 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 SEPT11Q9NVA2 429 aaKnown RBP15.42■□□□□ 0.06
SMG9-201ENST00000270066 POLR3AO14802 1390 aaPredicted RBP15.42■□□□□ 0.06
SMG9-201ENST00000270066 ZNF397Q8NF99 534 aaPredicted RBP15.42■□□□□ 0.06
SMG9-201ENST00000270066 CBX1P83916 185 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 CCDC112Q8NEF3 446 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 ZFYP08048 801 aaPredicted RBP15.42■□□□□ 0.06
SMG9-201ENST00000270066 POTEJP0CG39 1038 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 KSR2Q6VAB6 950 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 MFSD6Q6ZSS7 791 aa15.42■□□□□ 0.06
SMG9-201ENST00000270066 MYO1BO43795 1136 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 TTC22Q5TAA0 569 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 BAG4O95429 457 aaKnown RBP15.41■□□□□ 0.06
SMG9-201ENST00000270066 NCOA7Q8NI08 942 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 NYXQ9GZU5 481 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 KAT14Q9H8E8 782 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 KIF20AO95235 890 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 TMEM67Q5HYA8 995 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 IQCEQ6IPM2 695 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 COPS6Q7L5N1 327 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 RHPN1Q8TCX5 695 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 C8orf37Q96NL8 207 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 ANO10Q9NW15 660 aa15.41■□□□□ 0.06
SMG9-201ENST00000270066 CCDC178Q5BJE1 867 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 ACSBG1Q96GR2 724 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 TSPY2A6NKD2 308 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 FGFR1OPO95684 399 aaKnown RBP15.4■□□□□ 0.06
SMG9-201ENST00000270066 NLRP3Q96P20 1036 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 FEZ1Q99689 392 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 FBLN1P23142 703 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 PPP4R3BQ5MIZ7 849 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 LRRC59Q96AG4 307 aaKnown RBP15.4■□□□□ 0.06
SMG9-201ENST00000270066 TBX22Q9Y458 520 aa15.4■□□□□ 0.06
SMG9-201ENST00000270066 CTAGE5O15320 804 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 ANXA1P04083 346 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
SMG9-201ENST00000270066 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
SMG9-201ENST00000270066 GRM8O00222 908 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms