RNA–Protein interactions for RNA: ENST00000269209.6

GAREM1-201, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAREM1, Length 3,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-201ENST00000269209 UBE3BQ7Z3V4 1068 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 BOLA2Q9H3K6 86 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 KIAA1211Q6ZU35 1233 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 BRINP3Q76B58 766 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 DIAPH3Q9NSV4 1193 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
GAREM1-201ENST00000269209 SLIT3O75094 1523 aa12.32□□□□□ -0.44
GAREM1-201ENST00000269209 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
GAREM1-201ENST00000269209 PXDNLA1KZ92 1463 aa12.31□□□□□ -0.44
GAREM1-201ENST00000269209 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
GAREM1-201ENST00000269209 HSP90AB4PQ58FF6 505 aa12.31□□□□□ -0.44
GAREM1-201ENST00000269209 EAF2Q96CJ1 260 aaPredicted RBP12.31□□□□□ -0.44
GAREM1-201ENST00000269209 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
GAREM1-201ENST00000269209 SASH1O94885 1247 aa12.31□□□□□ -0.44
GAREM1-201ENST00000269209 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
GAREM1-201ENST00000269209 ZNF335Q9H4Z2 1342 aaPredicted RBP12.31□□□□□ -0.44
GAREM1-201ENST00000269209 NEURL1BA8MQ27 555 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 PRPF40AO75400 957 aaKnown RBP12.3□□□□□ -0.44
GAREM1-201ENST00000269209 SNRPA1P09661 255 aaKnown RBP12.3□□□□□ -0.44
GAREM1-201ENST00000269209 LARP1Q6PKG0 1096 aaKnown RBP12.3□□□□□ -0.44
GAREM1-201ENST00000269209 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 SPATA31A3Q5VYP0 1347 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 L1TD1Q5T7N2 865 aaKnown RBP12.3□□□□□ -0.44
GAREM1-201ENST00000269209 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 ECHDC1Q9NTX5 307 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 CACNA1FO60840 1977 aa12.3□□□□□ -0.44
GAREM1-201ENST00000269209 SGSM2O43147 1006 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 GLRX3O76003 335 aaKnown RBP12.29□□□□□ -0.44
GAREM1-201ENST00000269209 KCNJ4P48050 445 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 GCKRQ14397 625 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 A0A087WZG4 1122 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 NUCB2P80303 420 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 CAVIN1Q6NZI2 390 aaKnown RBP12.29□□□□□ -0.44
GAREM1-201ENST00000269209 FAM227BQ96M60 508 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 ZDHHC9Q9Y397 364 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 NCAPD2Q15021 1401 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 HEG1Q9ULI3 1381 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 A0A0G2JS52 829 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 A1BGP04217 495 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 EVA1CP58658 441 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 PTH1RQ03431 593 aa12.29□□□□□ -0.44
GAREM1-201ENST00000269209 PRPF40BQ6NWY9 871 aaKnown RBP12.28□□□□□ -0.44
GAREM1-201ENST00000269209 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
GAREM1-201ENST00000269209 CHGBP05060 677 aa12.28□□□□□ -0.44
GAREM1-201ENST00000269209 GPATCH3Q96I76 525 aa12.28□□□□□ -0.44
GAREM1-201ENST00000269209 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
GAREM1-201ENST00000269209 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
GAREM1-201ENST00000269209 CASTP20810 708 aaKnown RBP12.27□□□□□ -0.44
GAREM1-201ENST00000269209 MTX1Q13505 466 aa12.27□□□□□ -0.44
GAREM1-201ENST00000269209 TCEANC2Q96MN5 208 aa12.27□□□□□ -0.44
GAREM1-201ENST00000269209 METTL22Q9BUU2 404 aaPredicted RBP12.27□□□□□ -0.44
GAREM1-201ENST00000269209 SLAIN2Q9P270 581 aa12.27□□□□□ -0.44
GAREM1-201ENST00000269209 LMO7Q8WWI1 1683 aa12.27□□□□□ -0.44
GAREM1-201ENST00000269209 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.44
GAREM1-201ENST00000269209 HSPA4P34932 840 aa12.27□□□□□ -0.45
GAREM1-201ENST00000269209 TTLL7Q6ZT98 887 aa12.27□□□□□ -0.45
GAREM1-201ENST00000269209 FSD1Q9BTV5 496 aa12.27□□□□□ -0.45
GAREM1-201ENST00000269209 GRPEL1Q9HAV7 217 aa12.27□□□□□ -0.45
GAREM1-201ENST00000269209 RBM27Q9P2N5 1060 aaKnown RBP12.27□□□□□ -0.45
GAREM1-201ENST00000269209 SNX14Q9Y5W7 946 aa12.27□□□□□ -0.45
GAREM1-201ENST00000269209 TRPM3Q9HCF6 1732 aaPredicted RBP12.27□□□□□ -0.45
GAREM1-201ENST00000269209 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.45
GAREM1-201ENST00000269209 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
GAREM1-201ENST00000269209 ADCK5Q3MIX3 580 aa12.26□□□□□ -0.45
GAREM1-201ENST00000269209 ERC1Q8IUD2 1116 aa12.26□□□□□ -0.45
GAREM1-201ENST00000269209 LSG1Q9H089 658 aaKnown RBP12.26□□□□□ -0.45
GAREM1-201ENST00000269209 CWC22Q9HCG8 908 aaKnown RBP12.26□□□□□ -0.45
GAREM1-201ENST00000269209 RAD50Q92878 1312 aa12.26□□□□□ -0.45
GAREM1-201ENST00000269209 FSD2A1L4K1 749 aa12.26□□□□□ -0.45
GAREM1-201ENST00000269209 COL9A3Q14050 684 aaPredicted RBP12.26□□□□□ -0.45
GAREM1-201ENST00000269209 DNAJC2Q99543 621 aaKnown RBP12.26□□□□□ -0.45
GAREM1-201ENST00000269209 AOX1Q06278 1338 aa12.26□□□□□ -0.45
GAREM1-201ENST00000269209 TFCP2Q12800 502 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
GAREM1-201ENST00000269209 TTC41PQ6P2S7 1318 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 NBPF26B4DH59 902 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 AK2P54819 239 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 NBPF10Q6P3W6 841 aaKnown RBP12.25□□□□□ -0.45
GAREM1-201ENST00000269209 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 NBPF15Q8N660 670 aa12.25□□□□□ -0.45
GAREM1-201ENST00000269209 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
GAREM1-201ENST00000269209 SKOR2Q2VWA4 1001 aaPredicted RBP12.24□□□□□ -0.45
GAREM1-201ENST00000269209 NEUROD6Q96NK8 337 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 NSFL1CQ9UNZ2 370 aaKnown RBP12.24□□□□□ -0.45
GAREM1-201ENST00000269209 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 STRCP1A6NGW2 1772 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 CYP2E1P05181 493 aaPredicted RBP12.24□□□□□ -0.45
GAREM1-201ENST00000269209 ANAPC15P60006 121 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 SYTL4Q96C24 671 aaPredicted RBP12.24□□□□□ -0.45
GAREM1-201ENST00000269209 LMBRD1Q9NUN5 540 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.24□□□□□ -0.45
GAREM1-201ENST00000269209 A0A0D9SFI3 127 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 MRE11P49959 708 aa12.24□□□□□ -0.45
GAREM1-201ENST00000269209 SLFNL1Q499Z3 407 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms