RNA–Protein interactions for RNA: ENST00000266088.8

SLC5A1-201, Transcript of solute carrier family 5 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A1, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A1-201ENST00000266088 C8orf58Q8NAV2 365 aa10.13□□□□□ -0.79
SLC5A1-201ENST00000266088 TMEM2Q9UHN6 1383 aa10.13□□□□□ -0.79
SLC5A1-201ENST00000266088 MINDY4BA8MYZ0 360 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 COPS6Q7L5N1 327 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 PPP1R42Q7Z4L9 355 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 XAGE3Q8WTP9 111 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 RPGRQ92834 1020 aaKnown RBP10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 NFATC2IPQ8NCF5 419 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 ZNF592Q92610 1267 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 EYA1Q99502 592 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 MAP3K19Q56UN5 1328 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 CASTP20810 708 aaKnown RBP10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 IMMTQ16891 758 aaKnown RBP10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 PRPF40BQ6NWY9 871 aaKnown RBP10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 PHACTR3Q96KR7 559 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 SNRKQ9NRH2 765 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 PTPRMP28827 1452 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 FLT4P35916 1363 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 PIK3R4Q99570 1358 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 TRAK2O60296 914 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 PLEKHG1Q9ULL1 1385 aa10.12□□□□□ -0.79
SLC5A1-201ENST00000266088 C6orf229H3BNL8 230 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 AKAP4Q5JQC9 854 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 TSHZ3Q63HK5 1081 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 RFC4P35249 363 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 KRT32Q14532 448 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 IL2RBP14784 551 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 KAT6BQ8WYB5 2073 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 KRT24Q2M2I5 525 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 DDX11Q96FC9 970 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 ZNF396Q96N95 335 aaPredicted RBP10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 MEIS3Q99687 375 aa10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 CLTCQ00610 1675 aaKnown RBP10.11□□□□□ -0.79
SLC5A1-201ENST00000266088 SLC5A1P13866 664 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 USP5P45974 858 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 OLFM4Q6UX06 510 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 DZIP1Q86YF9 867 aaKnown RBP10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 TMOD2Q9NZR1 351 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 ME1P48163 572 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 MAP3K12Q12852 859 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 VSIG10Q8N0Z9 540 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 CDK5RAP3Q96JB5 506 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 SOGA3Q5TF21 947 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 MBD3O95983 291 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 NAPBQ9H115 298 aa10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
SLC5A1-201ENST00000266088 TXLNAP40222 546 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 TSPOAP1O95153 1857 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 POLR3DP05423 398 aaPredicted RBP10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 NBPF6Q5VWK0 638 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 HOMER1Q86YM7 354 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 NBPF4Q96M43 638 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 ECHDC1Q9NTX5 307 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 LMTK3Q96Q04 1460 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 CDK12Q9NYV4 1490 aaPredicted RBP10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 WDR33Q9C0J8 1336 aaKnown RBP10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 GOLIM4O00461 696 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 HOXC9P31274 260 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 DDX46Q7L014 1031 aaKnown RBP10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 NAT10Q9H0A0 1025 aaKnown RBP10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 BTG4Q9NY30 223 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 IQSEC2Q5JU85 1478 aa10.09□□□□□ -0.79
SLC5A1-201ENST00000266088 A0A0U1RQG5 324 aaPredicted RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 MPHOSPH10O00566 681 aaKnown RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 TSPYL6Q8N831 410 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 CDC5LQ99459 802 aaKnown RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 MKNK2Q9HBH9 465 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 DDX17Q92841 729 aaKnown RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 IGHDP01880 384 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 KRT85P78386 507 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 CDKL5O76039 1030 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 KRT18P05783 430 aaKnown RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 FERMT3Q86UX7 667 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 CCDC82Q8N4S0 544 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 CRACR2BQ8N4Y2 399 aaPredicted RBP10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 KIF24Q5T7B8 1368 aa10.08□□□□□ -0.8
SLC5A1-201ENST00000266088 IP6K1Q92551 441 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 ZSCAN31Q96LW9 406 aaPredicted RBP10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 R3HCC1Q9Y3T6 440 aaKnown RBP10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 PLEKHG3A1L390 1219 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 LTKP29376 864 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 EPS15P42566 896 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 CCDC83Q8IWF9 413 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 PDILTQ8N807 584 aa10.07□□□□□ -0.8
SLC5A1-201ENST00000266088 RANBP6O60518 1105 aaKnown RBP10.06□□□□□ -0.8
SLC5A1-201ENST00000266088 TNNT3P45378 269 aaPredicted RBP10.06□□□□□ -0.8
SLC5A1-201ENST00000266088 LMBR1LQ6UX01 489 aa10.06□□□□□ -0.8
SLC5A1-201ENST00000266088 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
SLC5A1-201ENST00000266088 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms