RNA–Protein interactions for RNA: ENST00000263733.4

FAM20B-201, Transcript of FAM20B, glycosaminoglycan xylosylkinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM20B, Length 5,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM20B-201ENST00000263733 HAND2P61296 217 aa22.59■■□□□ 1.21
FAM20B-201ENST00000263733 SEPT7Q16181 437 aaKnown RBP22.59■■□□□ 1.21
FAM20B-201ENST00000263733 DNAJC25Q9H1X3 360 aa22.59■■□□□ 1.21
FAM20B-201ENST00000263733 ANXA1P04083 346 aa22.59■■□□□ 1.21
FAM20B-201ENST00000263733 NEK1Q96PY6 1258 aa22.59■■□□□ 1.21
FAM20B-201ENST00000263733 PLB1Q6P1J6 1458 aa22.58■■□□□ 1.21
FAM20B-201ENST00000263733 PTCD1O75127 700 aaKnown RBP22.58■■□□□ 1.21
FAM20B-201ENST00000263733 FAM200AQ8TCP9 573 aa22.58■■□□□ 1.21
FAM20B-201ENST00000263733 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.21
FAM20B-201ENST00000263733 BMP2KQ9NSY1 1161 aaPredicted RBP22.58■■□□□ 1.21
FAM20B-201ENST00000263733 IL16Q14005 1332 aa22.58■■□□□ 1.21
FAM20B-201ENST00000263733 ZNF213O14771 459 aa22.58■■□□□ 1.21
FAM20B-201ENST00000263733 USP16Q9Y5T5 823 aa22.57■■□□□ 1.2
FAM20B-201ENST00000263733 CCDC12Q8WUD4 166 aaPredicted RBP22.57■■□□□ 1.2
FAM20B-201ENST00000263733 GOLIM4O00461 696 aa22.57■■□□□ 1.2
FAM20B-201ENST00000263733 LIG1P18858 919 aa22.57■■□□□ 1.2
FAM20B-201ENST00000263733 NAPBQ9H115 298 aa22.57■■□□□ 1.2
FAM20B-201ENST00000263733 RHPN1Q8TCX5 695 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 PI4KAP2A4QPH2 592 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 PI4KAP1Q8N8J0 262 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 C8orf58Q8NAV2 365 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 SMARCC1Q92922 1105 aaPredicted RBP22.56■■□□□ 1.2
FAM20B-201ENST00000263733 BRF1Q92994 677 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 RNF216Q9NWF9 866 aaPredicted RBP22.56■■□□□ 1.2
FAM20B-201ENST00000263733 ORC3Q9UBD5 711 aaPredicted RBP22.56■■□□□ 1.2
FAM20B-201ENST00000263733 DNAI1Q9UI46 699 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 MAP3K2Q9Y2U5 619 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.56■■□□□ 1.24e-8■■□□□ 11.7
FAM20B-201ENST00000263733 JARID2Q92833 1246 aaPredicted RBP22.56■■□□□ 1.2
FAM20B-201ENST00000263733 CCDC113Q9H0I3 377 aa22.56■■□□□ 1.2
FAM20B-201ENST00000263733 SNRKQ9NRH2 765 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 SLC12A7Q9Y666 1083 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 RNF187Q5TA31 235 aaPredicted RBP22.55■■□□□ 1.2
FAM20B-201ENST00000263733 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 F13A1P00488 732 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 USP5P45974 858 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 ARHGAP45Q92619 1136 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 GOLGA8AA7E2F4 631 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 GIMAP7Q8NHV1 300 aa22.55■■□□□ 1.2
FAM20B-201ENST00000263733 CCDC171Q6TFL3 1326 aa22.54■■□□□ 1.2
FAM20B-201ENST00000263733 MRPL50Q8N5N7 158 aaKnown RBP22.54■■□□□ 1.2
FAM20B-201ENST00000263733 TIGD1Q96MW7 591 aa22.54■■□□□ 1.2
FAM20B-201ENST00000263733 PTGS1P23219 599 aa22.54■■□□□ 1.2
FAM20B-201ENST00000263733 BCCIPQ9P287 314 aaKnown RBP eCLIP22.54■■□□□ 1.2
FAM20B-201ENST00000263733 CCDC150Q8NCX0 1101 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 RBSNQ9H1K0 784 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 CACNA2D4Q7Z3S7 1137 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
FAM20B-201ENST00000263733 AKAP2Q9Y2D5 859 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 IFIT3O14879 490 aaKnown RBP22.53■■□□□ 1.2
FAM20B-201ENST00000263733 LUZP1Q86V48 1076 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 NOS1P29475 1434 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 FKBP15Q5T1M5 1219 aa22.53■■□□□ 1.2
FAM20B-201ENST00000263733 YEATS4O95619 227 aa22.52■■□□□ 1.2
FAM20B-201ENST00000263733 SSRP1Q08945 709 aaKnown RBP22.52■■□□□ 1.2
FAM20B-201ENST00000263733 A0A087WZG4 1122 aa22.52■■□□□ 1.2
FAM20B-201ENST00000263733 AOPEPQ8N6M6 819 aa22.52■■□□□ 1.2
FAM20B-201ENST00000263733 UBASH3AP57075 661 aa22.52■■□□□ 1.2
FAM20B-201ENST00000263733 MICU3Q86XE3 530 aa22.52■■□□□ 1.2
FAM20B-201ENST00000263733 IPO4Q8TEX9 1081 aaKnown RBP22.52■■□□□ 1.2
FAM20B-201ENST00000263733 CCDC94Q9BW85 323 aaPredicted RBP22.52■■□□□ 1.2
FAM20B-201ENST00000263733 TMEM132AQ24JP5 1023 aa22.51■■□□□ 1.19
FAM20B-201ENST00000263733 CTR9Q6PD62 1173 aa22.51■■□□□ 1.19
FAM20B-201ENST00000263733 IQGAP2Q13576 1575 aa22.51■■□□□ 1.19
FAM20B-201ENST00000263733 GPATCH11Q8N954 259 aa22.51■■□□□ 1.19
FAM20B-201ENST00000263733 RBM8AQ9Y5S9 174 aaKnown RBP22.51■■□□□ 1.19
FAM20B-201ENST00000263733 CAVIN2O95810 425 aa22.51■■□□□ 1.19
FAM20B-201ENST00000263733 MATR3P43243 847 aaKnown RBP eCLIP22.51■■□□□ 1.19
FAM20B-201ENST00000263733 TSPYL6Q8N831 410 aa22.51■■□□□ 1.19
FAM20B-201ENST00000263733 KIAA0586Q9BVV6 1533 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 TYRO3Q06418 890 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 RANBP6O60518 1105 aaKnown RBP22.5■■□□□ 1.19
FAM20B-201ENST00000263733 PAFAH1B1P43034 410 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 CCDC178Q5BJE1 867 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 TDRD12Q587J7 1177 aaKnown RBP22.5■■□□□ 1.19
FAM20B-201ENST00000263733 MCM3P25205 808 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 HS1BP3Q53T59 392 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 DYDC1Q8WWB3 177 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 ZSCAN16Q9H4T2 348 aaPredicted RBP22.5■■□□□ 1.19
FAM20B-201ENST00000263733 ZBTB40Q9NUA8 1239 aa22.5■■□□□ 1.19
FAM20B-201ENST00000263733 ASXL1Q8IXJ9 1541 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 CCDC196A0A1B0GTZ2 297 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 MCM6Q14566 821 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 DDX46Q7L014 1031 aaKnown RBP22.49■■□□□ 1.19
FAM20B-201ENST00000263733 CCDC102BQ68D86 513 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 WASLO00401 505 aaPredicted RBP22.49■■□□□ 1.19
FAM20B-201ENST00000263733 RALGAPBQ86X10 1494 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 IARSP41252 1262 aaKnown RBP22.49■■□□□ 1.19
FAM20B-201ENST00000263733 ANAPC15P60006 121 aa22.49■■□□□ 1.19
FAM20B-201ENST00000263733 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
FAM20B-201ENST00000263733 NSD2O96028 1365 aa22.48■■□□□ 1.19
FAM20B-201ENST00000263733 FAM135AQ9P2D6 1515 aa22.48■■□□□ 1.19
FAM20B-201ENST00000263733 DNMBPQ6XZF7 1577 aa22.48■■□□□ 1.19
FAM20B-201ENST00000263733 PLEKHM2Q8IWE5 1019 aa22.48■■□□□ 1.19
FAM20B-201ENST00000263733 SYKP43405 635 aa22.47■■□□□ 1.19
FAM20B-201ENST00000263733 IDI1Q13907 227 aa22.47■■□□□ 1.19
FAM20B-201ENST00000263733 BICDL1Q6ZP65 573 aa22.47■■□□□ 1.19
FAM20B-201ENST00000263733 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
FAM20B-201ENST00000263733 USO1O60763 962 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms