RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 SIPA1L3O60292 1781 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-201ENST00000262675 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
TTC39A-201ENST00000262675 TIAM2Q8IVF5 1701 aa12.35□□□□□ -0.43
TTC39A-201ENST00000262675 E9PSI1 815 aa12.35□□□□□ -0.43
TTC39A-201ENST00000262675 IL6STP40189 918 aaPredicted RBP12.35□□□□□ -0.43
TTC39A-201ENST00000262675 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
TTC39A-201ENST00000262675 BRIP1Q9BX63 1249 aa12.35□□□□□ -0.43
TTC39A-201ENST00000262675 CARMIL3Q8ND23 1372 aa12.34□□□□□ -0.43
TTC39A-201ENST00000262675 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
TTC39A-201ENST00000262675 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
TTC39A-201ENST00000262675 ZNF790Q6PG37 636 aa12.34□□□□□ -0.43
TTC39A-201ENST00000262675 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
TTC39A-201ENST00000262675 BCL2L12Q9HB09 334 aa12.34□□□□□ -0.43
TTC39A-201ENST00000262675 DICER1Q9UPY3 1922 aaKnown RBP12.34□□□□□ -0.43
TTC39A-201ENST00000262675 CFAP53Q96M91 514 aa12.33□□□□□ -0.44
TTC39A-201ENST00000262675 COL3A1P02461 1466 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-201ENST00000262675 CCDC88AQ3V6T2 1871 aa12.33□□□□□ -0.44
TTC39A-201ENST00000262675 RGL2O15211 777 aa12.33□□□□□ -0.44
TTC39A-201ENST00000262675 CENPQQ7L2Z9 268 aaPredicted RBP12.33□□□□□ -0.44
TTC39A-201ENST00000262675 LTBP3Q9NS15 1303 aa12.33□□□□□ -0.44
TTC39A-201ENST00000262675 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
TTC39A-201ENST00000262675 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
TTC39A-201ENST00000262675 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
TTC39A-201ENST00000262675 RASSF7Q02833 373 aa12.32□□□□□ -0.44
TTC39A-201ENST00000262675 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
TTC39A-201ENST00000262675 BACH2Q9BYV9 841 aa12.32□□□□□ -0.44
TTC39A-201ENST00000262675 FER1L6Q2WGJ9 1857 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 CEMIPQ8WUJ3 1361 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 U2SURPO15042 1029 aaKnown RBP12.31□□□□□ -0.44
TTC39A-201ENST00000262675 PDE4AP27815 886 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 ST5P78524 1137 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 STYK1Q6J9G0 422 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
TTC39A-201ENST00000262675 SETDB2Q96T68 719 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 CEP350Q5VT06 3117 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 ANKRD31Q8N7Z5 1873 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 BCORQ6W2J9 1755 aa12.31□□□□□ -0.44
TTC39A-201ENST00000262675 AAMPQ13685 434 aa12.3□□□□□ -0.44
TTC39A-201ENST00000262675 TBC1D9BQ66K14 1250 aa12.3□□□□□ -0.44
TTC39A-201ENST00000262675 CLEC4GQ6UXB4 293 aa12.3□□□□□ -0.44
TTC39A-201ENST00000262675 IL17REQ8NFR9 667 aa12.3□□□□□ -0.44
TTC39A-201ENST00000262675 BCL11AQ9H165 835 aa12.3□□□□□ -0.44
TTC39A-201ENST00000262675 ZNF652Q9Y2D9 606 aa12.3□□□□□ -0.44
TTC39A-201ENST00000262675 NPHP1O15259 732 aa12.29□□□□□ -0.44
TTC39A-201ENST00000262675 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
TTC39A-201ENST00000262675 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
TTC39A-201ENST00000262675 ZNF622Q969S3 477 aaKnown RBP eCLIP12.29□□□□□ -0.44
TTC39A-201ENST00000262675 NFKBIEO00221 500 aa12.29□□□□□ -0.44
TTC39A-201ENST00000262675 PLIN1O60240 522 aa12.29□□□□□ -0.44
TTC39A-201ENST00000262675 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
TTC39A-201ENST00000262675 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
TTC39A-201ENST00000262675 APAF1O14727 1248 aa12.28□□□□□ -0.44
TTC39A-201ENST00000262675 MASTLQ96GX5 879 aa12.28□□□□□ -0.44
TTC39A-201ENST00000262675 TAOK3Q9H2K8 898 aa12.28□□□□□ -0.44
TTC39A-201ENST00000262675 HTATSF1O43719 755 aaKnown RBP12.28□□□□□ -0.44
TTC39A-201ENST00000262675 ERFEQ4G0M1 354 aa12.28□□□□□ -0.44
TTC39A-201ENST00000262675 COL11A2P13942 1736 aaPredicted RBP12.27□□□□□ -0.44
TTC39A-201ENST00000262675 CAMTA2O94983 1202 aa12.27□□□□□ -0.45
TTC39A-201ENST00000262675 PDE3AQ14432 1141 aa12.27□□□□□ -0.45
TTC39A-201ENST00000262675 RTF1Q92541 710 aaKnown RBP12.27□□□□□ -0.45
TTC39A-201ENST00000262675 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
TTC39A-201ENST00000262675 TBC1D2BQ9UPU7 963 aa12.27□□□□□ -0.45
TTC39A-201ENST00000262675 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
TTC39A-201ENST00000262675 CCDC27Q2M243 656 aa12.26□□□□□ -0.45
TTC39A-201ENST00000262675 DZIP3Q86Y13 1208 aaKnown RBP12.26□□□□□ -0.45
TTC39A-201ENST00000262675 RUNDC1Q96C34 613 aa12.26□□□□□ -0.45
TTC39A-201ENST00000262675 ZNF330Q9Y3S2 320 aaPredicted RBP12.26□□□□□ -0.45
TTC39A-201ENST00000262675 IQCA1LA6NCM1 817 aa12.26□□□□□ -0.45
TTC39A-201ENST00000262675 C21orf2O43822 256 aa12.26□□□□□ -0.45
TTC39A-201ENST00000262675 SCN4AP35499 1836 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 SRGNP10124 158 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 PRKAR2BP31323 418 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 PRELPP51888 382 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 A1BGP04217 495 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 NPR1P16066 1061 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
TTC39A-201ENST00000262675 CCDC93Q567U6 631 aa12.24□□□□□ -0.45
TTC39A-201ENST00000262675 PRPF40BQ6NWY9 871 aaKnown RBP12.24□□□□□ -0.45
TTC39A-201ENST00000262675 TPTE2Q6XPS3 522 aa12.24□□□□□ -0.45
TTC39A-201ENST00000262675 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
TTC39A-201ENST00000262675 CCDC146Q8IYE0 955 aa12.24□□□□□ -0.45
TTC39A-201ENST00000262675 CREBZFQ9NS37 354 aa12.24□□□□□ -0.45
TTC39A-201ENST00000262675 NEFMP07197 916 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 HTRA3P83110 453 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 CACNA1SQ13698 1873 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 SLX4Q8IY92 1834 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 KLRG2A4D1S0 409 aaPredicted RBP12.23□□□□□ -0.45
TTC39A-201ENST00000262675 C20orf194Q5TEA3 1177 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 RTKN2Q8IZC4 609 aa12.23□□□□□ -0.45
TTC39A-201ENST00000262675 L3MBTL3Q96JM7 780 aaPredicted RBP12.23□□□□□ -0.45
TTC39A-201ENST00000262675 LAMB4A4D0S4 1761 aa12.22□□□□□ -0.45
TTC39A-201ENST00000262675 POTECB2RU33 542 aa12.22□□□□□ -0.45
TTC39A-201ENST00000262675 ALDH1B1P30837 517 aa12.22□□□□□ -0.45
TTC39A-201ENST00000262675 GRIPAP1Q4V328 841 aa12.22□□□□□ -0.45
TTC39A-201ENST00000262675 TNS4Q8IZW8 715 aa12.22□□□□□ -0.45
TTC39A-201ENST00000262675 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
TTC39A-201ENST00000262675 CT47B1P0C2W7 299 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms