RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 TFIP11Q9UBB9 837 aaKnown RBP15.55■□□□□ 0.08
SEC23B-201ENST00000262544 ZNF330Q9Y3S2 320 aaPredicted RBP15.55■□□□□ 0.08
SEC23B-201ENST00000262544 NRXN3Q9Y4C0 1643 aa15.55■□□□□ 0.08
SEC23B-201ENST00000262544 SALL3Q9BXA9 1300 aa15.55■□□□□ 0.08
SEC23B-201ENST00000262544 UQCRHLA0A096LP55 91 aa15.55■□□□□ 0.08
SEC23B-201ENST00000262544 UQCRHP07919 91 aa15.55■□□□□ 0.08
SEC23B-201ENST00000262544 RIC3Q7Z5B4 369 aa15.55■□□□□ 0.08
SEC23B-201ENST00000262544 FSD1Q9BTV5 496 aa15.55■□□□□ 0.08
SEC23B-201ENST00000262544 BEND3Q5T5X7 828 aa15.54■□□□□ 0.08
SEC23B-201ENST00000262544 THEMISQ8N1K5 641 aaPredicted RBP15.54■□□□□ 0.08
SEC23B-201ENST00000262544 FBXW7Q969H0 707 aa15.54■□□□□ 0.08
SEC23B-201ENST00000262544 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
SEC23B-201ENST00000262544 LRRC2Q9BYS8 371 aa15.54■□□□□ 0.08
SEC23B-201ENST00000262544 PDCL3Q9H2J4 239 aa15.54■□□□□ 0.08
SEC23B-201ENST00000262544 ITSN1Q15811 1721 aa15.54■□□□□ 0.08
SEC23B-201ENST00000262544 FGD1P98174 961 aa15.53■□□□□ 0.08
SEC23B-201ENST00000262544 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
SEC23B-201ENST00000262544 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.53■□□□□ 0.08
SEC23B-201ENST00000262544 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■■■□ 22
SEC23B-201ENST00000262544 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.53■□□□□ 0.08
SEC23B-201ENST00000262544 DDX17Q92841 729 aaKnown RBP15.53■□□□□ 0.08
SEC23B-201ENST00000262544 CUL4AQ13619 759 aa15.52■□□□□ 0.08
SEC23B-201ENST00000262544 DNAJC2Q99543 621 aaKnown RBP15.52■□□□□ 0.08
SEC23B-201ENST00000262544 TAF6LQ9Y6J9 622 aa15.52■□□□□ 0.08
SEC23B-201ENST00000262544 RAB11FIP3O75154 756 aa15.52■□□□□ 0.08
SEC23B-201ENST00000262544 CKAP2LQ8IYA6 745 aa15.52■□□□□ 0.08
SEC23B-201ENST00000262544 NLRP2Q9NX02 1062 aa15.52■□□□□ 0.08
SEC23B-201ENST00000262544 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.52■□□□□ 0.08
SEC23B-201ENST00000262544 USP31Q70CQ4 1352 aa15.52■□□□□ 0.08
SEC23B-201ENST00000262544 RAD50Q92878 1312 aa15.52■□□□□ 0.07
SEC23B-201ENST00000262544 ATP5J2-PTCD1G3V325 749 aa15.52■□□□□ 0.07
SEC23B-201ENST00000262544 PTCD1O75127 700 aaKnown RBP15.52■□□□□ 0.07
SEC23B-201ENST00000262544 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.07
SEC23B-201ENST00000262544 LSG1Q9H089 658 aaKnown RBP15.52■□□□□ 0.07
SEC23B-201ENST00000262544 STAP2Q9UGK3 403 aa15.52■□□□□ 0.07
SEC23B-201ENST00000262544 TCHHQ07283 1943 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 CSB-PGBD3P0DP91 1061 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 DDX11Q96FC9 970 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 BICC1Q9H694 974 aaKnown RBP15.51■□□□□ 0.07
SEC23B-201ENST00000262544 NOL7Q9UMY1 257 aaKnown RBP15.51■□□□□ 0.07
SEC23B-201ENST00000262544 ZKSCAN5Q9Y2L8 839 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
SEC23B-201ENST00000262544 OFD1O75665 1012 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 GLRX3O76003 335 aaKnown RBP15.51■□□□□ 0.07
SEC23B-201ENST00000262544 ZKSCAN1P17029 563 aaPredicted RBP15.51■□□□□ 0.07
SEC23B-201ENST00000262544 ANAPC15P60006 121 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 ECHDC1Q9NTX5 307 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 CYP46A1Q9Y6A2 500 aa15.51■□□□□ 0.07
SEC23B-201ENST00000262544 GOLGA6L4A6NEF3 574 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 ADCY5O95622 1261 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 LARP1BQ659C4 914 aaKnown RBP15.5■□□□□ 0.07
SEC23B-201ENST00000262544 C3P01024 1663 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 HSP90B1P14625 803 aaKnown RBP15.5■□□□□ 0.07
SEC23B-201ENST00000262544 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
SEC23B-201ENST00000262544 SUCLG2Q96I99 432 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 DBF4Q9UBU7 674 aaPredicted RBP15.5■□□□□ 0.07
SEC23B-201ENST00000262544 CCDC39Q9UFE4 941 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.5■□□□□ 0.07
SEC23B-201ENST00000262544 RBM8AQ9Y5S9 174 aaKnown RBP15.5■□□□□ 0.07
SEC23B-201ENST00000262544 KDRP35968 1356 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 SLFNL1Q499Z3 407 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 GPATCH3Q96I76 525 aa15.5■□□□□ 0.07
SEC23B-201ENST00000262544 PLEKHO1Q53GL0 409 aaPredicted RBP15.49■□□□□ 0.07
SEC23B-201ENST00000262544 EAF2Q96CJ1 260 aaPredicted RBP15.49■□□□□ 0.07
SEC23B-201ENST00000262544 TBX22Q9Y458 520 aa15.49■□□□□ 0.07
SEC23B-201ENST00000262544 ME3Q16798 604 aa15.49■□□□□ 0.07
SEC23B-201ENST00000262544 CCDC129Q6ZRS4 1044 aa15.49■□□□□ 0.07
SEC23B-201ENST00000262544 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
SEC23B-201ENST00000262544 F13A1P00488 732 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 RUFY2Q8WXA3 655 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 MYD88Q99836 296 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 PLEKHG1Q9ULL1 1385 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 PHF14O94880 888 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 CCDC85AQ96PX6 553 aaPredicted RBP15.48■□□□□ 0.07
SEC23B-201ENST00000262544 A0A0D9SFI3 127 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 KIAA2012Q0VF49 1180 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 DRC7Q8IY82 874 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 ANKRD24Q8TF21 1146 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 TECPR2O15040 1411 aa15.48■□□□□ 0.07
SEC23B-201ENST00000262544 RGPD8O14715 1765 aaPredicted RBP15.47■□□□□ 0.07
SEC23B-201ENST00000262544 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
SEC23B-201ENST00000262544 IP6K1Q92551 441 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 AXIN2Q9Y2T1 843 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 SETD1AO15047 1707 aaKnown RBP15.47■□□□□ 0.07
SEC23B-201ENST00000262544 KDM4AO75164 1064 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 GCP02774 474 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 NFATC2IPQ8NCF5 419 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 HYPKQ9NX55 129 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 TPCN1Q9ULQ1 816 aa15.47■□□□□ 0.07
SEC23B-201ENST00000262544 POLA2Q14181 598 aa15.46■□□□□ 0.07
SEC23B-201ENST00000262544 HSP90AB4PQ58FF6 505 aa15.46■□□□□ 0.07
SEC23B-201ENST00000262544 CDC37L1Q7L3B6 337 aa15.46■□□□□ 0.07
SEC23B-201ENST00000262544 NEUROD6Q96NK8 337 aa15.46■□□□□ 0.07
SEC23B-201ENST00000262544 SEC62Q99442 399 aaKnown RBP15.46■□□□□ 0.07
SEC23B-201ENST00000262544 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
SEC23B-201ENST00000262544 CHRNA2Q15822 529 aa15.46■□□□□ 0.07
SEC23B-201ENST00000262544 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.06
SEC23B-201ENST00000262544 COPS6Q7L5N1 327 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms