RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 IGKV5-2P06315 115 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 LRRCC1Q9C099 1032 aa14.35□□□□□ -0.11
LIN28A-201ENST00000254231 SRP68Q9UHB9 627 aaKnown RBP14.35□□□□□ -0.11
LIN28A-201ENST00000254231 KDM6AO15550 1401 aaPredicted RBP14.35□□□□□ -0.11
LIN28A-201ENST00000254231 FRAT2O75474 233 aaPredicted RBP14.34□□□□□ -0.11
LIN28A-201ENST00000254231 KCNJ4P48050 445 aa14.34□□□□□ -0.11
LIN28A-201ENST00000254231 TIMM10P62072 90 aa14.34□□□□□ -0.11
LIN28A-201ENST00000254231 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
LIN28A-201ENST00000254231 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
LIN28A-201ENST00000254231 ANKRD44Q8N8A2 993 aa14.34□□□□□ -0.11
LIN28A-201ENST00000254231 SLC4A9Q96Q91 983 aa14.34□□□□□ -0.11
LIN28A-201ENST00000254231 SPATA31A1Q5TZJ5 1347 aa14.34□□□□□ -0.11
LIN28A-201ENST00000254231 CCNL1Q9UK58 526 aaPredicted RBP14.34□□□□□ -0.11
LIN28A-201ENST00000254231 NIP7Q9Y221 180 aaKnown RBP eCLIP14.34□□□□□ -0.11
LIN28A-201ENST00000254231 RGPD5Q99666 1765 aa14.33□□□□□ -0.11
LIN28A-201ENST00000254231 PDIA6Q15084 440 aa14.33□□□□□ -0.12
LIN28A-201ENST00000254231 FBXW7Q969H0 707 aa14.33□□□□□ -0.12
LIN28A-201ENST00000254231 COL5A2P05997 1499 aaPredicted RBP14.33□□□□□ -0.12
LIN28A-201ENST00000254231 ANO2Q9NQ90 1003 aa14.33□□□□□ -0.12
LIN28A-201ENST00000254231 LTN1O94822 1766 aa14.32□□□□□ -0.12
LIN28A-201ENST00000254231 NFAT5O94916 1531 aa14.32□□□□□ -0.12
LIN28A-201ENST00000254231 ERVV-2B6SEH9 535 aa14.32□□□□□ -0.12
LIN28A-201ENST00000254231 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
LIN28A-201ENST00000254231 LINS1Q8NG48 757 aa14.32□□□□□ -0.12
LIN28A-201ENST00000254231 CRKLP46109 303 aaKnown RBP14.32□□□□□ -0.12
LIN28A-201ENST00000254231 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
LIN28A-201ENST00000254231 DCCP43146 1447 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 NEURL1BA8MQ27 555 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 GCKRQ14397 625 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 CLASRPQ8N2M8 674 aaKnown RBP14.31□□□□□ -0.12
LIN28A-201ENST00000254231 KIF24Q5T7B8 1368 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 FKBP4Q02790 459 aaKnown RBP eCLIP14.31□□□□□ -0.12
LIN28A-201ENST00000254231 C8orf34Q49A92 452 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 PUS3Q9BZE2 481 aaKnown RBP14.31□□□□□ -0.12
LIN28A-201ENST00000254231 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 NUCB1Q02818 461 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 ITPK1Q13572 414 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 SLFNL1Q499Z3 407 aa14.31□□□□□ -0.12
LIN28A-201ENST00000254231 CWC27Q6UX04 472 aaKnown RBP14.31□□□□□ -0.12
LIN28A-201ENST00000254231 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
LIN28A-201ENST00000254231 CCDC57Q2TAC2 916 aa14.3□□□□□ -0.12
LIN28A-201ENST00000254231 CWC25Q9NXE8 425 aaPredicted RBP14.3□□□□□ -0.12
LIN28A-201ENST00000254231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.3□□□□□ -0.12
LIN28A-201ENST00000254231 NRKQ7Z2Y5 1582 aa14.3□□□□□ -0.12
LIN28A-201ENST00000254231 CHGBP05060 677 aa14.3□□□□□ -0.12
LIN28A-201ENST00000254231 APBA3O96018 575 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 GCC1Q96CN9 775 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.29□□□□□ -0.12
LIN28A-201ENST00000254231 TAF5LO75529 589 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 ATP8B2P98198 1209 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 RHPN1Q8TCX5 695 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
LIN28A-201ENST00000254231 TLR7Q9NYK1 1049 aaKnown RBP14.29□□□□□ -0.12
LIN28A-201ENST00000254231 ADCY9O60503 1353 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 DLG5Q8TDM6 1919 aa14.29□□□□□ -0.12
LIN28A-201ENST00000254231 HDAC1Q13547 482 aaPredicted RBP14.28□□□□□ -0.12
LIN28A-201ENST00000254231 SMC5Q8IY18 1101 aa14.28□□□□□ -0.12
LIN28A-201ENST00000254231 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
LIN28A-201ENST00000254231 LRRC24Q50LG9 513 aa14.28□□□□□ -0.12
LIN28A-201ENST00000254231 DCTPP1Q9H773 170 aa14.28□□□□□ -0.12
LIN28A-201ENST00000254231 ZPR1O75312 459 aa14.28□□□□□ -0.12
LIN28A-201ENST00000254231 HEG1Q9ULI3 1381 aa14.28□□□□□ -0.12
LIN28A-201ENST00000254231 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.12
LIN28A-201ENST00000254231 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.12
LIN28A-201ENST00000254231 SPATA31A7Q8IWB4 1347 aa14.27□□□□□ -0.12
LIN28A-201ENST00000254231 TFCP2Q12800 502 aa14.27□□□□□ -0.12
LIN28A-201ENST00000254231 PLEKHM2Q8IWE5 1019 aa14.27□□□□□ -0.12
LIN28A-201ENST00000254231 SDSP20132 328 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 MX1P20591 662 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 USPL1Q5W0Q7 1092 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 FAM196AQ6ZSG2 479 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 CHMP4AQ9BY43 222 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 CPDO75976 1380 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 JCADQ9P266 1359 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 LDHAL6AQ6ZMR3 332 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 SLC51AQ86UW1 340 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 AK7Q96M32 723 aa14.27□□□□□ -0.13
LIN28A-201ENST00000254231 RFC4P35249 363 aa14.26□□□□□ -0.13
LIN28A-201ENST00000254231 DDX46Q7L014 1031 aaKnown RBP14.26□□□□□ -0.13
LIN28A-201ENST00000254231 TRPC5Q9UL62 973 aaPredicted RBP14.26□□□□□ -0.13
LIN28A-201ENST00000254231 PLBD2Q8NHP8 589 aa14.26□□□□□ -0.13
LIN28A-201ENST00000254231 ROBO1Q9Y6N7 1651 aa14.25□□□□□ -0.13
LIN28A-201ENST00000254231 TBC1D9Q6ZT07 1266 aa14.25□□□□□ -0.13
LIN28A-201ENST00000254231 C22orf23Q9BZE7 217 aa14.25□□□□□ -0.13
LIN28A-201ENST00000254231 SEC31BQ9NQW1 1179 aa14.25□□□□□ -0.13
LIN28A-201ENST00000254231 NOP58Q9Y2X3 529 aaKnown RBP14.25□□□□□ -0.13
LIN28A-201ENST00000254231 IRS4O14654 1257 aaPredicted RBP14.25□□□□□ -0.13
LIN28A-201ENST00000254231 CCDC87Q9NVE4 849 aa14.25□□□□□ -0.13
LIN28A-201ENST00000254231 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
LIN28A-201ENST00000254231 GSPT1P15170 499 aaKnown RBP14.24□□□□□ -0.13
LIN28A-201ENST00000254231 PDE1AP54750 535 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 UPF3BQ9BZI7 483 aaKnown RBP14.24□□□□□ -0.13
LIN28A-201ENST00000254231 MTMR7Q9Y216 660 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 PALLDQ8WX93 1383 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 WTIPA6NIX2 430 aaPredicted RBP14.24□□□□□ -0.13
LIN28A-201ENST00000254231 CYP19A1P11511 503 aaPredicted RBP14.24□□□□□ -0.13
LIN28A-201ENST00000254231 FOSBP53539 338 aa14.24□□□□□ -0.13
LIN28A-201ENST00000254231 TCEANC2Q96MN5 208 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms