RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PPP4R2Q9NY27 417 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 COG6Q9Y2V7 657 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 ATP10DQ9P241 1426 aa16.37■□□□□ 0.21
LSM8-201ENST00000249299 MYL6BP14649 208 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 ITPK1Q13572 414 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 ANKRD13DQ6ZTN6 518 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 PTF1AQ7RTS3 328 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 NPM2Q86SE8 214 aaKnown RBP16.36■□□□□ 0.21
LSM8-201ENST00000249299 EXOC6Q8TAG9 804 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 CCNL1Q9UK58 526 aaPredicted RBP16.36■□□□□ 0.21
LSM8-201ENST00000249299 BTAF1O14981 1849 aa16.36■□□□□ 0.21
LSM8-201ENST00000249299 CRKLP46109 303 aaKnown RBP16.35■□□□□ 0.21
LSM8-201ENST00000249299 EIF5P55010 431 aaKnown RBP16.35■□□□□ 0.21
LSM8-201ENST00000249299 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
LSM8-201ENST00000249299 INTS5Q6P9B9 1019 aaKnown RBP16.35■□□□□ 0.21
LSM8-201ENST00000249299 ITPRIPQ8IWB1 547 aa16.35■□□□□ 0.21
LSM8-201ENST00000249299 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
LSM8-201ENST00000249299 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
LSM8-201ENST00000249299 KAT6BQ8WYB5 2073 aa16.35■□□□□ 0.21
LSM8-201ENST00000249299 A0A087WZG4 1122 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 ERVV-1B6SEH8 477 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 ZBTB7BO15156 539 aaPredicted RBP16.34■□□□□ 0.21
LSM8-201ENST00000249299 ALDH1L1O75891 902 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 ANXA1P04083 346 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 RIC3Q7Z5B4 369 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 LINS1Q8NG48 757 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 ADCY9O60503 1353 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 TJP1Q07157 1748 aa16.34■□□□□ 0.21
LSM8-201ENST00000249299 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
LSM8-201ENST00000249299 BEND3Q5T5X7 828 aa16.33■□□□□ 0.2
LSM8-201ENST00000249299 METTL22Q9BUU2 404 aaPredicted RBP16.33■□□□□ 0.2
LSM8-201ENST00000249299 SRCIN1Q9C0H9 1055 aa16.33■□□□□ 0.2
LSM8-201ENST00000249299 ZBTB40Q9NUA8 1239 aa16.33■□□□□ 0.2
LSM8-201ENST00000249299 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
LSM8-201ENST00000249299 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
LSM8-201ENST00000249299 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
LSM8-201ENST00000249299 KIF6Q6ZMV9 814 aa16.32■□□□□ 0.2
LSM8-201ENST00000249299 CCDC125Q86Z20 511 aa16.32■□□□□ 0.2
LSM8-201ENST00000249299 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
LSM8-201ENST00000249299 RREB1Q92766 1687 aa16.32■□□□□ 0.2
LSM8-201ENST00000249299 LY75O60449 1722 aa16.32■□□□□ 0.2
LSM8-201ENST00000249299 F6X3S4 739 aa16.31■□□□□ 0.2
LSM8-201ENST00000249299 RPS6KA4O75676 772 aa16.31■□□□□ 0.2
LSM8-201ENST00000249299 GNAI3P08754 354 aa16.31■□□□□ 0.2
LSM8-201ENST00000249299 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
LSM8-201ENST00000249299 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
LSM8-201ENST00000249299 SLC4A10Q6U841 1118 aa16.31■□□□□ 0.2
LSM8-201ENST00000249299 LINC00116Q8NCU8 138 aa16.31■□□□□ 0.2
LSM8-201ENST00000249299 APBA3O96018 575 aa16.3■□□□□ 0.2
LSM8-201ENST00000249299 MAP3K15Q6ZN16 1313 aa16.3■□□□□ 0.2
LSM8-201ENST00000249299 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
LSM8-201ENST00000249299 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
LSM8-201ENST00000249299 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
LSM8-201ENST00000249299 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
LSM8-201ENST00000249299 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
LSM8-201ENST00000249299 RTCBQ9Y3I0 505 aaKnown RBP16.28■□□□□ 0.2
LSM8-201ENST00000249299 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
LSM8-201ENST00000249299 UTYO14607 1347 aa16.28■□□□□ 0.2
LSM8-201ENST00000249299 PIP4K2AP48426 406 aaPredicted RBP16.27■□□□□ 0.2
LSM8-201ENST00000249299 TCIRG1Q13488 830 aa16.27■□□□□ 0.2
LSM8-201ENST00000249299 DZIP3Q86Y13 1208 aaKnown RBP16.27■□□□□ 0.2
LSM8-201ENST00000249299 CCDC191Q8NCU4 936 aa16.27■□□□□ 0.2
LSM8-201ENST00000249299 LRRC4BQ9NT99 713 aa16.27■□□□□ 0.2
LSM8-201ENST00000249299 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
LSM8-201ENST00000249299 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
LSM8-201ENST00000249299 EP400Q96L91 3159 aa16.26■□□□□ 0.19
LSM8-201ENST00000249299 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
LSM8-201ENST00000249299 CCDC136Q96JN2 1154 aa16.26■□□□□ 0.19
LSM8-201ENST00000249299 USP44Q9H0E7 712 aa16.26■□□□□ 0.19
LSM8-201ENST00000249299 COL15A1P39059 1388 aa16.26■□□□□ 0.19
LSM8-201ENST00000249299 IGKV5-2P06315 115 aa16.25■□□□□ 0.19
LSM8-201ENST00000249299 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
LSM8-201ENST00000249299 AK7Q96M32 723 aa16.25■□□□□ 0.19
LSM8-201ENST00000249299 ISCA1Q9BUE6 129 aa16.25■□□□□ 0.19
LSM8-201ENST00000249299 ZNF652Q9Y2D9 606 aa16.25■□□□□ 0.19
LSM8-201ENST00000249299 N4BP2Q86UW6 1770 aaPredicted RBP16.25■□□□□ 0.19
LSM8-201ENST00000249299 GNAI2P04899 355 aa16.24■□□□□ 0.19
LSM8-201ENST00000249299 SSFA2P28290 1259 aa16.24■□□□□ 0.19
LSM8-201ENST00000249299 HDAC1Q13547 482 aaPredicted RBP16.24■□□□□ 0.19
LSM8-201ENST00000249299 GCKRQ14397 625 aa16.24■□□□□ 0.19
LSM8-201ENST00000249299 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
LSM8-201ENST00000249299 GRM8O00222 908 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 GNPATO15228 680 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 UBTFL1P0CB47 393 aaPredicted RBP16.23■□□□□ 0.19
LSM8-201ENST00000249299 BAG6P46379 1132 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 FLAD1Q8NFF5 587 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 MEIS3Q99687 375 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 MYD88Q99836 296 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 RWDD1Q9H446 243 aaPredicted RBP16.23■□□□□ 0.19
LSM8-201ENST00000249299 ZBTB3Q9H5J0 574 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 CWC25Q9NXE8 425 aaPredicted RBP16.23■□□□□ 0.19
LSM8-201ENST00000249299 NARFQ9UHQ1 456 aa16.23■□□□□ 0.19
LSM8-201ENST00000249299 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
LSM8-201ENST00000249299 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
LSM8-201ENST00000249299 TRAPPC3LQ5T215 181 aa16.22■□□□□ 0.19
LSM8-201ENST00000249299 CAMKK2Q96RR4 588 aa16.22■□□□□ 0.19
LSM8-201ENST00000249299 C9orf78Q9NZ63 289 aaPredicted RBP16.22■□□□□ 0.19
LSM8-201ENST00000249299 C4BP0C0L5 1744 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms