RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 GCP02774 474 aa15.13■□□□□ 0.01
RAB3IP-201ENST00000247833 GLIPR1L2Q4G1C9 344 aa15.13■□□□□ 0.01
RAB3IP-201ENST00000247833 HDAC5Q9UQL6 1122 aa15.13■□□□□ 0.01
RAB3IP-201ENST00000247833 STX6O43752 255 aa15.13■□□□□ 0.01
RAB3IP-201ENST00000247833 HSP90B1P14625 803 aaKnown RBP15.13■□□□□ 0.01
RAB3IP-201ENST00000247833 AKAP4Q5JQC9 854 aa15.13■□□□□ 0.01
RAB3IP-201ENST00000247833 FAM13BQ9NYF5 915 aa15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 ATP6V1DQ9Y5K8 247 aa15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 RAD50Q92878 1312 aa15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 INTS4Q96HW7 963 aaKnown RBP15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 USP25Q9UHP3 1055 aa15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 GJB2P29033 226 aa15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 PI4K2BQ8TCG2 481 aa15.12■□□□□ 0.01
RAB3IP-201ENST00000247833 RNMTO43148 476 aaKnown RBP15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 PTH1RQ03431 593 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 C3P01024 1663 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 SYT1P21579 422 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 TTC5Q8N0Z6 440 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 PPP1R9BQ96SB3 815 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 MYD88Q99836 296 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 KSR2Q6VAB6 950 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 ERC1Q8IUD2 1116 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 FAM227BQ96M60 508 aa15.11■□□□□ 0.01
RAB3IP-201ENST00000247833 MON2Q7Z3U7 1717 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 HCLS1P14317 486 aaPredicted RBP15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 CUL4AQ13619 759 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 ZNF830Q96NB3 372 aaPredicted RBP15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 BICC1Q9H694 974 aaKnown RBP15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 ZSCAN22P10073 491 aaPredicted RBP15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 PROSER2Q86WR7 435 aaPredicted RBP15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 NDUFB9Q9Y6M9 179 aa15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 LARP1BQ659C4 914 aaKnown RBP15.1■□□□□ 0.01
RAB3IP-201ENST00000247833 GRM8O00222 908 aa15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 DNM1Q05193 864 aaKnown RBP15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 ADCK5Q3MIX3 580 aa15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 RBM8AQ9Y5S9 174 aaKnown RBP15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 PEAK1Q9H792 1746 aa15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 RUFY3Q7L099 469 aa15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
RAB3IP-201ENST00000247833 ATP5J2-PTCD1G3V325 749 aa15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 PTCD1O75127 700 aaKnown RBP15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 FAM173BQ6P4H8 233 aa15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 GIMAP6Q6P9H5 292 aa15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 EDC3Q96F86 508 aaKnown RBP15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 NEUROD6Q96NK8 337 aa15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 LSG1Q9H089 658 aaKnown RBP15.08■□□□□ 0.01
RAB3IP-201ENST00000247833 LARGE1O95461 756 aa15.08■□□□□ 0
RAB3IP-201ENST00000247833 NMIQ13287 307 aaPredicted RBP15.08■□□□□ 0
RAB3IP-201ENST00000247833 PPFIA3O75145 1194 aa15.08■□□□□ 0
RAB3IP-201ENST00000247833 POLA2Q14181 598 aa15.08■□□□□ 0
RAB3IP-201ENST00000247833 BABAM1Q9NWV8 329 aa15.08■□□□□ 0
RAB3IP-201ENST00000247833 GIGYF1O75420 1035 aaPredicted RBP15.07■□□□□ 0
RAB3IP-201ENST00000247833 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 REREQ9P2R6 1566 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 CAMK4Q16566 473 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 RNF20Q5VTR2 975 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 COPS6Q7L5N1 327 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 XAGE3Q8WTP9 111 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 EVI5LQ96CN4 794 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 HYPKQ9NX55 129 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 NFATC2IPQ8NCF5 419 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 AOX1Q06278 1338 aa15.07■□□□□ 0
RAB3IP-201ENST00000247833 SETD1AO15047 1707 aaKnown RBP15.07■□□□□ 0
RAB3IP-201ENST00000247833 F13A1P00488 732 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 CHRNA2Q15822 529 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 DRC7Q8IY82 874 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 SPC24Q8NBT2 197 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 TLR7Q9NYK1 1049 aaKnown RBP15.06■□□□□ 0
RAB3IP-201ENST00000247833 TFIP11Q9UBB9 837 aaKnown RBP15.06■□□□□ 0
RAB3IP-201ENST00000247833 CEBPZQ03701 1054 aaKnown RBP15.06■□□□□ 0
RAB3IP-201ENST00000247833 CSPP1Q1MSJ5 1256 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 DDX17Q92841 729 aaKnown RBP15.06■□□□□ 0
RAB3IP-201ENST00000247833 EAF2Q96CJ1 260 aaPredicted RBP15.06■□□□□ 0
RAB3IP-201ENST00000247833 SSH2Q76I76 1423 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 CCDC183Q5T5S1 534 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 UBE3BQ7Z3V4 1068 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 LINS1Q8NG48 757 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
RAB3IP-201ENST00000247833 TTC41PQ6P2S7 1318 aa15.05■□□□□ 0
RAB3IP-201ENST00000247833 DIP2AQ14689 1571 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 ALDH1L1O75891 902 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 DDX11Q96FC9 970 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 H3BQV1 296 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 TATP17735 454 aaPredicted RBP15.05■□□□□ -0
RAB3IP-201ENST00000247833 PSMA5P28066 241 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 IFFO2Q5TF58 517 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 ZKSCAN5Q9Y2L8 839 aa15.05■□□□□ -0
RAB3IP-201ENST00000247833 CREB3L3Q68CJ9 461 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 LARP1Q6PKG0 1096 aaKnown RBP15.04■□□□□ -0
RAB3IP-201ENST00000247833 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
RAB3IP-201ENST00000247833 AKAP12Q02952 1782 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms