RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 MARCH10Q8NA82 808 aaPredicted RBP17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 TBC1D32Q96NH3 1257 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 SLC4A9Q96Q91 983 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
SNRNP27-201ENST00000244227 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
SNRNP27-201ENST00000244227 BCL9LQ86UU0 1499 aa17.04■□□□□ 0.32
SNRNP27-201ENST00000244227 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
SNRNP27-201ENST00000244227 SURF6O75683 361 aaKnown RBP17.04■□□□□ 0.32
SNRNP27-201ENST00000244227 PRIM1P49642 420 aaKnown RBP17.04■□□□□ 0.32
SNRNP27-201ENST00000244227 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
SNRNP27-201ENST00000244227 PDE1AP54750 535 aa17.03■□□□□ 0.32
SNRNP27-201ENST00000244227 CERKQ8TCT0 537 aa17.03■□□□□ 0.32
SNRNP27-201ENST00000244227 TEX13AQ9BXU3 409 aaPredicted RBP17.03■□□□□ 0.32
SNRNP27-201ENST00000244227 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
SNRNP27-201ENST00000244227 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 TBC1D9Q6ZT07 1266 aa17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.31
SNRNP27-201ENST00000244227 CASP7P55210 303 aa17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 EPHA10Q5JZY3 1008 aa17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 FNBP4Q8N3X1 1017 aaPredicted RBP17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 NGLY1Q96IV0 654 aa17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 C8orf37Q96NL8 207 aa17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
SNRNP27-201ENST00000244227 VPS72Q15906 364 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
SNRNP27-201ENST00000244227 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 STAP2Q9UGK3 403 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 COL15A1P39059 1388 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 CDC45O75419 566 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 SDSP20132 328 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 JARID2Q92833 1246 aaPredicted RBP17■□□□□ 0.31
SNRNP27-201ENST00000244227 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
SNRNP27-201ENST00000244227 STARD3NLO95772 234 aa16.99■□□□□ 0.31
SNRNP27-201ENST00000244227 CYP19A1P11511 503 aaPredicted RBP16.99■□□□□ 0.31
SNRNP27-201ENST00000244227 MX1P20591 662 aa16.99■□□□□ 0.31
SNRNP27-201ENST00000244227 PA2G4Q9UQ80 394 aaKnown RBP16.99■□□□□ 0.31
SNRNP27-201ENST00000244227 SPATA31A6Q5VVP1 1343 aa16.99■□□□□ 0.31
SNRNP27-201ENST00000244227 HSP90AB4PQ58FF6 505 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 ZBTB3Q9H5J0 574 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 A0A087WZG4 1122 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 H7C1W4 665 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 TSHZ3Q63HK5 1081 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 ACSBG1Q96GR2 724 aa16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
SNRNP27-201ENST00000244227 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SNRNP27-201ENST00000244227 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
SNRNP27-201ENST00000244227 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
SNRNP27-201ENST00000244227 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.96■□□□□ 0.31
SNRNP27-201ENST00000244227 NUTM1Q86Y26 1132 aa16.96■□□□□ 0.3
SNRNP27-201ENST00000244227 ISCA1Q9BUE6 129 aa16.96■□□□□ 0.3
SNRNP27-201ENST00000244227 TJP1Q07157 1748 aa16.95■□□□□ 0.3
SNRNP27-201ENST00000244227 RFX5P48382 616 aaPredicted RBP16.95■□□□□ 0.3
SNRNP27-201ENST00000244227 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
SNRNP27-201ENST00000244227 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
SNRNP27-201ENST00000244227 CWC25Q9NXE8 425 aaPredicted RBP16.95■□□□□ 0.3
SNRNP27-201ENST00000244227 AOX1Q06278 1338 aa16.95■□□□□ 0.3
SNRNP27-201ENST00000244227 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
SNRNP27-201ENST00000244227 TCIRG1Q13488 830 aa16.94■□□□□ 0.3
SNRNP27-201ENST00000244227 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
SNRNP27-201ENST00000244227 TUBGCP6Q96RT7 1819 aa16.94■□□□□ 0.3
SNRNP27-201ENST00000244227 SASH1O94885 1247 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 HSPA1LP34931 641 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 FOXO4P98177 505 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 USP21Q9UK80 565 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 TRIM28Q13263 835 aaKnown RBP16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 ERC1Q8IUD2 1116 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 KLHDC4Q8TBB5 520 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 ZNF330Q9Y3S2 320 aaPredicted RBP16.93■□□□□ 0.3
SNRNP27-201ENST00000244227 MAP3K15Q6ZN16 1313 aa16.92■□□□□ 0.3
SNRNP27-201ENST00000244227 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
SNRNP27-201ENST00000244227 KCNQ2O43526 872 aa16.92■□□□□ 0.3
SNRNP27-201ENST00000244227 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
SNRNP27-201ENST00000244227 PTPN12Q05209 780 aaKnown RBP16.91■□□□□ 0.3
SNRNP27-201ENST00000244227 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNRNP27-201ENST00000244227 KIF6Q6ZMV9 814 aa16.91■□□□□ 0.3
SNRNP27-201ENST00000244227 HLFQ16534 295 aa16.91■□□□□ 0.3
SNRNP27-201ENST00000244227 CLASRPQ8N2M8 674 aaKnown RBP16.91■□□□□ 0.3
SNRNP27-201ENST00000244227 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
SNRNP27-201ENST00000244227 IL6STP40189 918 aaPredicted RBP16.9■□□□□ 0.3
SNRNP27-201ENST00000244227 SIK1P57059 783 aa16.9■□□□□ 0.3
SNRNP27-201ENST00000244227 INTS5Q6P9B9 1019 aaKnown RBP16.9■□□□□ 0.3
SNRNP27-201ENST00000244227 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
SNRNP27-201ENST00000244227 A0A0G2JS52 829 aa16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 LMBR1LQ6UX01 489 aa16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 KIF2CQ99661 725 aa16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 SIL1Q9H173 461 aa16.89■□□□□ 0.29
SNRNP27-201ENST00000244227 PALLDQ8WX93 1383 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms