RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 SPATA31A6Q5VVP1 1343 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 SRGAP3O43295 1099 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 RAB11FIP3O75154 756 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 STAP2Q9UGK3 403 aa19.71■□□□□ 0.75
ITGA4-201ENST00000233573 XAGE3Q8WTP9 111 aa19.7■□□□□ 0.74
ITGA4-201ENST00000233573 IGKV5-2P06315 115 aa19.69■□□□□ 0.74
ITGA4-201ENST00000233573 SYTL4Q96C24 671 aaPredicted RBP19.69■□□□□ 0.74
ITGA4-201ENST00000233573 CDCA7Q9BWT1 371 aaPredicted RBP19.69■□□□□ 0.74
ITGA4-201ENST00000233573 MX1P20591 662 aa19.69■□□□□ 0.74
ITGA4-201ENST00000233573 FAM98CQ17RN3 349 aaKnown RBP19.69■□□□□ 0.74
ITGA4-201ENST00000233573 COPS6Q7L5N1 327 aa19.69■□□□□ 0.74
ITGA4-201ENST00000233573 C9orf78Q9NZ63 289 aaPredicted RBP19.69■□□□□ 0.74
ITGA4-201ENST00000233573 SURF6O75683 361 aaKnown RBP19.68■□□□□ 0.74
ITGA4-201ENST00000233573 GRM8O00222 908 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 EIF5BO60841 1220 aaKnown RBP19.67■□□□□ 0.74
ITGA4-201ENST00000233573 BARGINQ6ZT62 677 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 FNBP4Q8N3X1 1017 aaPredicted RBP19.67■□□□□ 0.74
ITGA4-201ENST00000233573 MARCH10Q8NA82 808 aaPredicted RBP19.67■□□□□ 0.74
ITGA4-201ENST00000233573 KAZALD1Q96I82 304 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 ARFGEF2Q9Y6D5 1785 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 BCL9O00512 1426 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 VPS72Q15906 364 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 RIC3Q7Z5B4 369 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 METTL22Q9BUU2 404 aaPredicted RBP19.67■□□□□ 0.74
ITGA4-201ENST00000233573 ANTXR1Q9H6X2 564 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 AOX1Q06278 1338 aa19.67■□□□□ 0.74
ITGA4-201ENST00000233573 RHPN1Q8TCX5 695 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 HDAC5Q9UQL6 1122 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 NEURL1BA8MQ27 555 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 NBPF26B4DH59 902 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 PRIM1P49642 420 aaKnown RBP19.66■□□□□ 0.74
ITGA4-201ENST00000233573 NBPF14Q5TI25 921 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 NBPF10Q6P3W6 841 aaKnown RBP19.66■□□□□ 0.74
ITGA4-201ENST00000233573 NBPF15Q8N660 670 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 USP21Q9UK80 565 aa19.66■□□□□ 0.74
ITGA4-201ENST00000233573 ERBB4Q15303 1308 aa19.65■□□□□ 0.74
ITGA4-201ENST00000233573 A0A0G2JS52 829 aa19.65■□□□□ 0.74
ITGA4-201ENST00000233573 TSHZ3Q63HK5 1081 aa19.65■□□□□ 0.74
ITGA4-201ENST00000233573 ANKRD13DQ6ZTN6 518 aa19.65■□□□□ 0.74
ITGA4-201ENST00000233573 SNX21Q969T3 373 aa19.65■□□□□ 0.74
ITGA4-201ENST00000233573 ACSBG1Q96GR2 724 aa19.65■□□□□ 0.74
ITGA4-201ENST00000233573 A1BGP04217 495 aa19.64■□□□□ 0.74
ITGA4-201ENST00000233573 MEX3CQ5U5Q3 659 aaKnown RBP19.64■□□□□ 0.74
ITGA4-201ENST00000233573 KIF1BPQ96EK5 621 aa19.64■□□□□ 0.74
ITGA4-201ENST00000233573 SUCLG2Q96I99 432 aa19.64■□□□□ 0.74
ITGA4-201ENST00000233573 IL1RAPL2Q9NP60 686 aa19.64■□□□□ 0.74
ITGA4-201ENST00000233573 RBM42Q9BTD8 480 aaKnown RBP19.64■□□□□ 0.73
ITGA4-201ENST00000233573 USP26Q9BXU7 913 aa19.64■□□□□ 0.73
ITGA4-201ENST00000233573 GCKRQ14397 625 aa19.63■□□□□ 0.73
ITGA4-201ENST00000233573 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
ITGA4-201ENST00000233573 AFDNP55196 1824 aaKnown RBP19.63■□□□□ 0.73
ITGA4-201ENST00000233573 NEXNQ0ZGT2 675 aa19.63■□□□□ 0.73
ITGA4-201ENST00000233573 NUP188Q5SRE5 1749 aa19.62■□□□□ 0.73
ITGA4-201ENST00000233573 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.62■□□□□ 0.73
ITGA4-201ENST00000233573 CASC1Q6TDU7 716 aa19.62■□□□□ 0.73
ITGA4-201ENST00000233573 MYD88Q99836 296 aa19.62■□□□□ 0.73
ITGA4-201ENST00000233573 NFKBIBQ15653 356 aa19.61■□□□□ 0.73
ITGA4-201ENST00000233573 DNAJC10Q8IXB1 793 aa19.61■□□□□ 0.73
ITGA4-201ENST00000233573 BICC1Q9H694 974 aaKnown RBP19.61■□□□□ 0.73
ITGA4-201ENST00000233573 SLC4A9Q96Q91 983 aa19.61■□□□□ 0.73
ITGA4-201ENST00000233573 NUTM1Q86Y26 1132 aa19.6■□□□□ 0.73
ITGA4-201ENST00000233573 PLBD2Q8NHP8 589 aa19.6■□□□□ 0.73
ITGA4-201ENST00000233573 PI4K2BQ8TCG2 481 aa19.6■□□□□ 0.73
ITGA4-201ENST00000233573 AFF2P51816 1311 aa19.59■□□□□ 0.73
ITGA4-201ENST00000233573 USP42Q9H9J4 1324 aaKnown RBP19.59■□□□□ 0.73
ITGA4-201ENST00000233573 COL15A1P39059 1388 aa19.59■□□□□ 0.73
ITGA4-201ENST00000233573 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
ITGA4-201ENST00000233573 SLKQ9H2G2 1235 aaPredicted RBP19.59■□□□□ 0.73
ITGA4-201ENST00000233573 TTLL7Q6ZT98 887 aa19.58■□□□□ 0.73
ITGA4-201ENST00000233573 HSCBQ8IWL3 235 aa19.58■□□□□ 0.73
ITGA4-201ENST00000233573 ERC2O15083 957 aa19.58■□□□□ 0.72
ITGA4-201ENST00000233573 PA2G4Q9UQ80 394 aaKnown RBP19.58■□□□□ 0.72
ITGA4-201ENST00000233573 EPHA10Q5JZY3 1008 aa19.57■□□□□ 0.72
ITGA4-201ENST00000233573 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
ITGA4-201ENST00000233573 KCNQ2O43526 872 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 REC8O95072 547 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 CHMLP26374 656 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 VSIG10Q8N0Z9 540 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 ZNF330Q9Y3S2 320 aaPredicted RBP19.56■□□□□ 0.72
ITGA4-201ENST00000233573 CD2BP2O95400 341 aaKnown RBP19.56■□□□□ 0.72
ITGA4-201ENST00000233573 CASP7P55210 303 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 ERC1Q8IUD2 1116 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 TJP1Q07157 1748 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 THSD7AQ9UPZ6 1657 aa19.56■□□□□ 0.72
ITGA4-201ENST00000233573 ESYT1Q9BSJ8 1104 aa19.55■□□□□ 0.72
ITGA4-201ENST00000233573 ATP5J2-PTCD1G3V325 749 aa19.55■□□□□ 0.72
ITGA4-201ENST00000233573 TTC41PQ6P2S7 1318 aa19.54■□□□□ 0.72
ITGA4-201ENST00000233573 SASH1O94885 1247 aa19.54■□□□□ 0.72
ITGA4-201ENST00000233573 OS9Q13438 667 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-201ENST00000233573 RABL6Q3YEC7 729 aaPredicted RBP19.54■□□□□ 0.72
ITGA4-201ENST00000233573 FAM182BQ5T319 152 aa19.54■□□□□ 0.72
ITGA4-201ENST00000233573 ZBTB3Q9H5J0 574 aa19.54■□□□□ 0.72
ITGA4-201ENST00000233573 TRIM6-TRIM34B2RNG4 842 aa19.53■□□□□ 0.72
ITGA4-201ENST00000233573 DDIT3P35638 169 aa19.53■□□□□ 0.72
ITGA4-201ENST00000233573 RILPL2Q969X0 211 aa19.53■□□□□ 0.72
ITGA4-201ENST00000233573 RABEP1Q15276 862 aa19.53■□□□□ 0.72
ITGA4-201ENST00000233573 CLASRPQ8N2M8 674 aaKnown RBP19.53■□□□□ 0.72
ITGA4-201ENST00000233573 JARID2Q92833 1246 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms