RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 FAM182BQ5T319 152 aa16.43■□□□□ 0.22
USP5-201ENST00000229268 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
USP5-201ENST00000229268 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
USP5-201ENST00000229268 IBTKQ9P2D0 1353 aaPredicted RBP16.43■□□□□ 0.22
USP5-201ENST00000229268 TOM1O60784 492 aa16.43■□□□□ 0.22
USP5-201ENST00000229268 HSP90AA1P07900 732 aaKnown RBP16.43■□□□□ 0.22
USP5-201ENST00000229268 GPTP24298 496 aa16.42■□□□□ 0.22
USP5-201ENST00000229268 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.227e-7■■■■□ 23
USP5-201ENST00000229268 NGLY1Q96IV0 654 aa16.42■□□□□ 0.22
USP5-201ENST00000229268 KCNQ4P56696 695 aa16.42■□□□□ 0.22
USP5-201ENST00000229268 AACSQ86V21 672 aa16.42■□□□□ 0.22
USP5-201ENST00000229268 KIF1BPQ96EK5 621 aa16.42■□□□□ 0.22
USP5-201ENST00000229268 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
USP5-201ENST00000229268 IFIT2P09913 472 aaKnown RBP16.41■□□□□ 0.22
USP5-201ENST00000229268 ANO2Q9NQ90 1003 aa16.41■□□□□ 0.22
USP5-201ENST00000229268 DDB1Q16531 1140 aa16.4■□□□□ 0.22
USP5-201ENST00000229268 HSCBQ8IWL3 235 aa16.4■□□□□ 0.22
USP5-201ENST00000229268 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
USP5-201ENST00000229268 POLA2Q14181 598 aa16.4■□□□□ 0.22
USP5-201ENST00000229268 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
USP5-201ENST00000229268 ATG3Q9NT62 314 aa16.4■□□□□ 0.22
USP5-201ENST00000229268 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
USP5-201ENST00000229268 KDM3BQ7LBC6 1761 aa16.39■□□□□ 0.21
USP5-201ENST00000229268 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
USP5-201ENST00000229268 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
USP5-201ENST00000229268 NDUFB9Q9Y6M9 179 aa16.39■□□□□ 0.21
USP5-201ENST00000229268 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
USP5-201ENST00000229268 SYNE4Q8N205 404 aa16.39■□□□□ 0.21
USP5-201ENST00000229268 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
USP5-201ENST00000229268 PLBD2Q8NHP8 589 aa16.38■□□□□ 0.21
USP5-201ENST00000229268 TLR7Q9NYK1 1049 aaKnown RBP16.38■□□□□ 0.21
USP5-201ENST00000229268 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
USP5-201ENST00000229268 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
USP5-201ENST00000229268 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
USP5-201ENST00000229268 RAB11FIP3O75154 756 aa16.37■□□□□ 0.21
USP5-201ENST00000229268 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
USP5-201ENST00000229268 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
USP5-201ENST00000229268 KCNQ2O43526 872 aa16.36■□□□□ 0.21
USP5-201ENST00000229268 CWC27Q6UX04 472 aaKnown RBP16.36■□□□□ 0.21
USP5-201ENST00000229268 BOLA2Q9H3K6 86 aa16.36■□□□□ 0.21
USP5-201ENST00000229268 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
USP5-201ENST00000229268 SASH1O94885 1247 aa16.36■□□□□ 0.21
USP5-201ENST00000229268 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
USP5-201ENST00000229268 ERC2O15083 957 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 STARD3NLO95772 234 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 HSP90AB4PQ58FF6 505 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 EAF2Q96CJ1 260 aaPredicted RBP16.35■□□□□ 0.21
USP5-201ENST00000229268 USP26Q9BXU7 913 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 IL25Q9H293 177 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 VIRMAQ69YN4 1812 aaKnown RBP16.35■□□□□ 0.21
USP5-201ENST00000229268 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
USP5-201ENST00000229268 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 KIF2CQ99661 725 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 ZBTB1Q9Y2K1 713 aa16.35■□□□□ 0.21
USP5-201ENST00000229268 CWC25Q9NXE8 425 aaPredicted RBP16.34■□□□□ 0.21
USP5-201ENST00000229268 RBM25P49756 843 aaKnown RBP16.34■□□□□ 0.21
USP5-201ENST00000229268 HDAC5Q9UQL6 1122 aa16.34■□□□□ 0.21
USP5-201ENST00000229268 HLFQ16534 295 aa16.34■□□□□ 0.21
USP5-201ENST00000229268 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.21
USP5-201ENST00000229268 CHMLP26374 656 aa16.33■□□□□ 0.21
USP5-201ENST00000229268 TFCP2Q12800 502 aa16.33■□□□□ 0.21
USP5-201ENST00000229268 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
USP5-201ENST00000229268 KIF6Q6ZMV9 814 aa16.33■□□□□ 0.2
USP5-201ENST00000229268 MARCH10Q8NA82 808 aaPredicted RBP16.33■□□□□ 0.2
USP5-201ENST00000229268 CACNA1FO60840 1977 aa16.33■□□□□ 0.2
USP5-201ENST00000229268 EIF5BO60841 1220 aaKnown RBP16.32■□□□□ 0.2
USP5-201ENST00000229268 REC8O95072 547 aa16.32■□□□□ 0.2
USP5-201ENST00000229268 OSBPL3Q9H4L5 887 aa16.32■□□□□ 0.2
USP5-201ENST00000229268 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
USP5-201ENST00000229268 PI4K2BQ8TCG2 481 aa16.32■□□□□ 0.2
USP5-201ENST00000229268 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
USP5-201ENST00000229268 CRYBG1Q9Y4K1 1723 aa16.32■□□□□ 0.2
USP5-201ENST00000229268 ESYT1Q9BSJ8 1104 aa16.31■□□□□ 0.2
USP5-201ENST00000229268 UPF3BQ9BZI7 483 aaKnown RBP16.31■□□□□ 0.2
USP5-201ENST00000229268 C5P01031 1676 aa16.31■□□□□ 0.2
USP5-201ENST00000229268 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
USP5-201ENST00000229268 DNAJC2Q99543 621 aaKnown RBP16.31■□□□□ 0.2
USP5-201ENST00000229268 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
USP5-201ENST00000229268 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
USP5-201ENST00000229268 EP400Q96L91 3159 aa16.31■□□□□ 0.2
USP5-201ENST00000229268 DTNBO60941 627 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 PTF1AQ7RTS3 328 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 ECHDC1Q9NTX5 307 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 TIMM10P62072 90 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 MTX1Q13505 466 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
USP5-201ENST00000229268 MEX3CQ5U5Q3 659 aaKnown RBP16.3■□□□□ 0.2
USP5-201ENST00000229268 CNTROBQ8N137 903 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 DIAPH3Q9NSV4 1193 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 STAP2Q9UGK3 403 aa16.3■□□□□ 0.2
USP5-201ENST00000229268 CHGBP05060 677 aa16.29■□□□□ 0.2
USP5-201ENST00000229268 TAF7LQ5H9L4 462 aa16.29■□□□□ 0.2
USP5-201ENST00000229268 GOLGB1Q14789 3259 aaKnown RBP16.29■□□□□ 0.2
USP5-201ENST00000229268 NEK4P51957 841 aa16.29■□□□□ 0.2
USP5-201ENST00000229268 LRRC24Q50LG9 513 aa16.29■□□□□ 0.2
USP5-201ENST00000229268 ERC1Q8IUD2 1116 aa16.29■□□□□ 0.2
USP5-201ENST00000229268 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
USP5-201ENST00000229268 PUS3Q9BZE2 481 aaKnown RBP16.29■□□□□ 0.2
USP5-201ENST00000229268 GLRX3O76003 335 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms