RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MAP4K4O95819 1239 aaPredicted RBP26.58■■□□□ 1.84
SMARCD2-201ENST00000225742 MBD3O95983 291 aa26.58■■□□□ 1.84
SMARCD2-201ENST00000225742 IFIT2P09913 472 aaKnown RBP26.58■■□□□ 1.84
SMARCD2-201ENST00000225742 PDIA6Q15084 440 aa26.58■■□□□ 1.84
SMARCD2-201ENST00000225742 ZNF790Q6PG37 636 aa26.58■■□□□ 1.84
SMARCD2-201ENST00000225742 DIAPH3Q9NSV4 1193 aa26.57■■□□□ 1.84
SMARCD2-201ENST00000225742 SNX14Q9Y5W7 946 aa26.57■■□□□ 1.84
SMARCD2-201ENST00000225742 KDM6AO15550 1401 aaPredicted RBP26.56■■□□□ 1.84
SMARCD2-201ENST00000225742 HIP1O00291 1037 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 PHKG2P15735 406 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 CCDC173Q0VFZ6 552 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 CWF19L2Q2TBE0 894 aaKnown RBP26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 ZSCAN23Q3MJ62 389 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 EVI5LQ96CN4 794 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 MRC1P22897 1456 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 C5P01031 1676 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 PRAMEF22A3QJZ6 481 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 ATF3P18847 181 aa26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 G3BP1Q13283 466 aaKnown RBP eCLIP26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 CAVIN1Q6NZI2 390 aaKnown RBP26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 UPF3BQ9BZI7 483 aaKnown RBP26.55■■□□□ 1.84
SMARCD2-201ENST00000225742 NCLP19338 710 aaKnown RBP26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 ZC3H6P61129 1189 aaKnown RBP26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 NEXNQ0ZGT2 675 aa26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 ANP32BQ92688 251 aaKnown RBP26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 SUCLG2Q96I99 432 aa26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 TTC14Q96N46 770 aa26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 NLRP2Q9NX02 1062 aa26.54■■□□□ 1.84
SMARCD2-201ENST00000225742 WDR33Q9C0J8 1336 aaKnown RBP26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 NASPP49321 788 aaPredicted RBP26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 IFNL2Q8IZJ0 200 aa26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 KCNB2Q92953 911 aa26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 PPP1R9BQ96SB3 815 aa26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 CLCN1P35523 988 aa26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 RIC3Q7Z5B4 369 aa26.53■■□□□ 1.84
SMARCD2-201ENST00000225742 CWC27Q6UX04 472 aaKnown RBP26.52■■□□□ 1.84
SMARCD2-201ENST00000225742 GPT2Q8TD30 523 aa26.52■■□□□ 1.84
SMARCD2-201ENST00000225742 KAZALD1Q96I82 304 aa26.52■■□□□ 1.84
SMARCD2-201ENST00000225742 AACSQ86V21 672 aa26.51■■□□□ 1.83
SMARCD2-201ENST00000225742 TRIM44Q96DX7 344 aaPredicted RBP26.51■■□□□ 1.83
SMARCD2-201ENST00000225742 TM6SF1Q9BZW5 370 aa26.51■■□□□ 1.83
SMARCD2-201ENST00000225742 PKD1L3Q7Z443 1732 aa26.51■■□□□ 1.83
SMARCD2-201ENST00000225742 BICC1Q9H694 974 aaKnown RBP26.51■■□□□ 1.83
SMARCD2-201ENST00000225742 DCAF5Q96JK2 942 aa26.5■■□□□ 1.83
SMARCD2-201ENST00000225742 METTL22Q9BUU2 404 aaPredicted RBP26.5■■□□□ 1.83
SMARCD2-201ENST00000225742 LIMCH1Q9UPQ0 1083 aa26.5■■□□□ 1.83
SMARCD2-201ENST00000225742 PA2G4Q9UQ80 394 aaKnown RBP26.5■■□□□ 1.83
SMARCD2-201ENST00000225742 IGKV5-2P06315 115 aa26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 COL15A1P39059 1388 aa26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 MEGF6O75095 1541 aa26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 NEURL1BA8MQ27 555 aa26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 AIMP1Q12904 312 aaKnown RBP26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 SNRKQ9NRH2 765 aa26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.49■■□□□ 1.83
SMARCD2-201ENST00000225742 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
SMARCD2-201ENST00000225742 SASH1O94885 1247 aa26.48■■□□□ 1.83
SMARCD2-201ENST00000225742 SNRPA1P09661 255 aaKnown RBP26.48■■□□□ 1.83
SMARCD2-201ENST00000225742 NOL8Q76FK4 1167 aaKnown RBP26.48■■□□□ 1.83
SMARCD2-201ENST00000225742 GCKRQ14397 625 aa26.47■■□□□ 1.83
SMARCD2-201ENST00000225742 RASEFQ8IZ41 740 aa26.47■■□□□ 1.83
SMARCD2-201ENST00000225742 NFATC2IPQ8NCF5 419 aa26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 XAGE3Q8WTP9 111 aa26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 ZSCAN31Q96LW9 406 aaPredicted RBP26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 TMEM94Q12767 1356 aa26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 ESPNB1AK53 854 aa26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 SLC39A6Q13433 755 aa26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 VPS53Q5VIR6 699 aa26.46■■□□□ 1.83
SMARCD2-201ENST00000225742 CPDO75976 1380 aa26.45■■□□□ 1.82
SMARCD2-201ENST00000225742 AK2P54819 239 aa26.45■■□□□ 1.82
SMARCD2-201ENST00000225742 TTC5Q8N0Z6 440 aa26.45■■□□□ 1.82
SMARCD2-201ENST00000225742 SYAP1Q96A49 352 aaPredicted RBP26.45■■□□□ 1.82
SMARCD2-201ENST00000225742 PARP4Q9UKK3 1724 aaKnown RBP26.45■■□□□ 1.82
SMARCD2-201ENST00000225742 CSB-PGBD3P0DP91 1061 aa26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 LRSAM1Q6UWE0 723 aa26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 EAF2Q96CJ1 260 aaPredicted RBP26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 FMNL2Q96PY5 1086 aa26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 COPS6Q7L5N1 327 aa26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 CADPS2Q86UW7 1296 aa26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 ZNF496Q96IT1 587 aaPredicted RBP26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 ZSWIM6Q9HCJ5 1215 aa26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 SH2B1Q9NRF2 756 aaPredicted RBP26.44■■□□□ 1.82
SMARCD2-201ENST00000225742 CCDC171Q6TFL3 1326 aa26.43■■□□□ 1.82
SMARCD2-201ENST00000225742 ANKRD13DQ6ZTN6 518 aa26.43■■□□□ 1.82
SMARCD2-201ENST00000225742 RUFY3Q7L099 469 aa26.43■■□□□ 1.82
SMARCD2-201ENST00000225742 FOXD4L5Q5VV16 416 aaPredicted RBP26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 LRP10Q7Z4F1 713 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 TMEM87AQ8NBN3 555 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 FOXD4L4Q8WXT5 416 aaPredicted RBP26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 COPRSQ9NQ92 184 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 LAMB4A4D0S4 1761 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 RPAP1Q9BWH6 1393 aaPredicted RBP26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 ZKSCAN1P17029 563 aaPredicted RBP26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 PTH1RQ03431 593 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 NECTIN1Q15223 517 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 MYD88Q99836 296 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 TMEM63CQ9P1W3 806 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 CYP46A1Q9Y6A2 500 aa26.42■■□□□ 1.82
SMARCD2-201ENST00000225742 MYL6BP14649 208 aa26.41■■□□□ 1.82
SMARCD2-201ENST00000225742 CASTP20810 708 aaKnown RBP26.41■■□□□ 1.82
SMARCD2-201ENST00000225742 STRCP1A6NGW2 1772 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms