RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 C8orf76Q96K31 380 aa21.57■■□□□ 1.04
CLIP2-201ENST00000223398 HSP90AA2PQ14568 343 aaPredicted RBP21.56■■□□□ 1.04
CLIP2-201ENST00000223398 EVI5LQ96CN4 794 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 NUP62CLQ9H1M0 184 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 CABP5Q9NP86 173 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 GCP02774 474 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 NLRP5P59047 1200 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 CATIPQ7Z7H3 387 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 FAM177A1Q8N128 213 aaPredicted RBP21.56■■□□□ 1.04
CLIP2-201ENST00000223398 MYO1BO43795 1136 aa21.56■■□□□ 1.04
CLIP2-201ENST00000223398 MTHFSDQ2M296 383 aaKnown RBP21.56■■□□□ 1.04
CLIP2-201ENST00000223398 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.55■■□□□ 1.04
CLIP2-201ENST00000223398 LIG1P18858 919 aa21.55■■□□□ 1.04
CLIP2-201ENST00000223398 DZIP3Q86Y13 1208 aaKnown RBP21.55■■□□□ 1.04
CLIP2-201ENST00000223398 CLEC11AQ9Y240 323 aa21.55■■□□□ 1.04
CLIP2-201ENST00000223398 HLA-DOAP06340 250 aa21.55■■□□□ 1.04
CLIP2-201ENST00000223398 CDR1P51861 262 aa21.54■■□□□ 1.04
CLIP2-201ENST00000223398 SSRP1Q08945 709 aaKnown RBP21.54■■□□□ 1.04
CLIP2-201ENST00000223398 SPTY2D1Q68D10 685 aaPredicted RBP21.54■■□□□ 1.04
CLIP2-201ENST00000223398 PEG3Q9GZU2 1588 aa21.54■■□□□ 1.04
CLIP2-201ENST00000223398 LMBR1LQ6UX01 489 aa21.54■■□□□ 1.04
CLIP2-201ENST00000223398 CCDC194A0A1B0GVG4 234 aa21.53■■□□□ 1.04
CLIP2-201ENST00000223398 TMEM67Q5HYA8 995 aa21.53■■□□□ 1.04
CLIP2-201ENST00000223398 MEIS3Q99687 375 aa21.53■■□□□ 1.04
CLIP2-201ENST00000223398 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
CLIP2-201ENST00000223398 POLKQ9UBT6 870 aa21.53■■□□□ 1.04
CLIP2-201ENST00000223398 HSP90B2PQ58FF3 399 aa21.53■■□□□ 1.04
CLIP2-201ENST00000223398 PDE4BQ07343 736 aa21.52■■□□□ 1.04
CLIP2-201ENST00000223398 PICALMQ13492 652 aa21.52■■□□□ 1.04
CLIP2-201ENST00000223398 KLHL10Q6JEL2 608 aa21.52■■□□□ 1.04
CLIP2-201ENST00000223398 PTPRKQ15262 1439 aa21.52■■□□□ 1.04
CLIP2-201ENST00000223398 HMGB1P09429 215 aaKnown RBP21.52■■□□□ 1.04
CLIP2-201ENST00000223398 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
CLIP2-201ENST00000223398 ZNF771Q7L3S4 317 aaPredicted RBP21.52■■□□□ 1.04
CLIP2-201ENST00000223398 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
CLIP2-201ENST00000223398 EIF5P55010 431 aaKnown RBP21.52■■□□□ 1.03
CLIP2-201ENST00000223398 MICU3Q86XE3 530 aa21.52■■□□□ 1.03
CLIP2-201ENST00000223398 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.03
CLIP2-201ENST00000223398 UTP14AQ9BVJ6 771 aaKnown RBP21.52■■□□□ 1.03
CLIP2-201ENST00000223398 KAT14Q9H8E8 782 aa21.52■■□□□ 1.03
CLIP2-201ENST00000223398 PPP4R3AQ6IN85 833 aa21.51■■□□□ 1.03
CLIP2-201ENST00000223398 MFSD6Q6ZSS7 791 aa21.51■■□□□ 1.03
CLIP2-201ENST00000223398 STX8Q9UNK0 236 aa21.51■■□□□ 1.03
CLIP2-201ENST00000223398 KAT6BQ8WYB5 2073 aa21.51■■□□□ 1.03
CLIP2-201ENST00000223398 ACBD3Q9H3P7 528 aa21.51■■□□□ 1.03
CLIP2-201ENST00000223398 ECM2O94769 699 aaPredicted RBP21.5■■□□□ 1.03
CLIP2-201ENST00000223398 ATP2B3Q16720 1220 aa21.5■■□□□ 1.03
CLIP2-201ENST00000223398 CYP7A1P22680 504 aa21.5■■□□□ 1.03
CLIP2-201ENST00000223398 LUC7LQ9NQ29 371 aaKnown RBP21.5■■□□□ 1.03
CLIP2-201ENST00000223398 PARP3Q9Y6F1 533 aa21.5■■□□□ 1.03
CLIP2-201ENST00000223398 SSR1P43307 286 aaKnown RBP21.5■■□□□ 1.03
CLIP2-201ENST00000223398 CRNKL1Q9BZJ0 848 aaKnown RBP21.5■■□□□ 1.03
CLIP2-201ENST00000223398 UQCRFS1P1P0C7P4 283 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 TEX35Q5T0J7 233 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 HELBQ8NG08 1087 aaPredicted RBP21.49■■□□□ 1.03
CLIP2-201ENST00000223398 MYO6Q9UM54 1294 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 RHPN1Q8TCX5 695 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 FILIP1Q7Z7B0 1213 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 POLD1P28340 1107 aa21.49■■□□□ 1.03
CLIP2-201ENST00000223398 RIMBP2O15034 1052 aa21.48■■□□□ 1.03
CLIP2-201ENST00000223398 ORAI2Q96SN7 254 aa21.48■■□□□ 1.03
CLIP2-201ENST00000223398 OGFOD1Q8N543 542 aa21.48■■□□□ 1.03
CLIP2-201ENST00000223398 NSFL1CQ9UNZ2 370 aaKnown RBP21.48■■□□□ 1.03
CLIP2-201ENST00000223398 NBPF14Q5TI25 921 aa21.48■■□□□ 1.03
CLIP2-201ENST00000223398 SETQ01105 290 aaPredicted RBP21.48■■□□□ 1.03
CLIP2-201ENST00000223398 EYA1Q99502 592 aa21.48■■□□□ 1.03
CLIP2-201ENST00000223398 USP16Q9Y5T5 823 aa21.48■■□□□ 1.03
CLIP2-201ENST00000223398 GRM8O00222 908 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 CBFA2T2O43439 604 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 DDX17Q92841 729 aaKnown RBP21.47■■□□□ 1.03
CLIP2-201ENST00000223398 FLT4P35916 1363 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 TMEM266Q2M3C6 531 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 CCDC181Q5TID7 509 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 GNPATO15228 680 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 GSTO1P78417 241 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 KRT24Q2M2I5 525 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 KSR2Q6VAB6 950 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 TPTE2Q6XPS3 522 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 JAG2Q9Y219 1238 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 CCP110O43303 1012 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 VEZTQ9HBM0 779 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 UGGT2Q9NYU1 1516 aa21.47■■□□□ 1.03
CLIP2-201ENST00000223398 PA2G4Q9UQ80 394 aaKnown RBP21.47■■□□□ 1.03
CLIP2-201ENST00000223398 RSPH6AQ9H0K4 717 aa21.46■■□□□ 1.03
CLIP2-201ENST00000223398 HDAC9Q9UKV0 1011 aa21.46■■□□□ 1.03
CLIP2-201ENST00000223398 IL16Q14005 1332 aa21.46■■□□□ 1.03
CLIP2-201ENST00000223398 SH2B1Q9NRF2 756 aaPredicted RBP21.46■■□□□ 1.03
CLIP2-201ENST00000223398 LIMCH1Q9UPQ0 1083 aa21.46■■□□□ 1.03
CLIP2-201ENST00000223398 PPP1R12BO60237 982 aaPredicted RBP21.45■■□□□ 1.03
CLIP2-201ENST00000223398 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
CLIP2-201ENST00000223398 SAMM50Q9Y512 469 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 SLC4A4Q9Y6R1 1079 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 EHMT1Q9H9B1 1298 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 HOXC9P31274 260 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 IARSP41252 1262 aaKnown RBP21.45■■□□□ 1.02
CLIP2-201ENST00000223398 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 RAB34Q9BZG1 259 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
CLIP2-201ENST00000223398 KIF5BP33176 963 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms