RNA–Protein interactions for RNA: ENST00000170564.6

GPATCH1-201, Transcript of G-patch domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPATCH1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-201ENST00000170564 SSH3Q8TE77 659 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 XAGE3Q8WTP9 111 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 NUP188Q5SRE5 1749 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 ESPNB1AK53 854 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 PPP1R42Q7Z4L9 355 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 TSHZ3Q63HK5 1081 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 COPS6Q7L5N1 327 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 TTC5Q8N0Z6 440 aa13.89□□□□□ -0.19
GPATCH1-201ENST00000170564 TTC22Q5TAA0 569 aa13.88□□□□□ -0.19
GPATCH1-201ENST00000170564 TBC1D9Q6ZT07 1266 aa13.88□□□□□ -0.19
GPATCH1-201ENST00000170564 AFDNP55196 1824 aaKnown RBP13.88□□□□□ -0.19
GPATCH1-201ENST00000170564 ADAMTS2O95450 1211 aa13.87□□□□□ -0.19
GPATCH1-201ENST00000170564 UTYO14607 1347 aa13.87□□□□□ -0.19
GPATCH1-201ENST00000170564 PTCD1O75127 700 aaKnown RBP13.87□□□□□ -0.19
GPATCH1-201ENST00000170564 HMMRO75330 724 aa13.87□□□□□ -0.19
GPATCH1-201ENST00000170564 NCLP19338 710 aaKnown RBP13.87□□□□□ -0.19
GPATCH1-201ENST00000170564 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
GPATCH1-201ENST00000170564 PIGBQ92521 554 aa13.86□□□□□ -0.19
GPATCH1-201ENST00000170564 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.86□□□□□ -0.19
GPATCH1-201ENST00000170564 CHMP4AQ9BY43 222 aa13.86□□□□□ -0.19
GPATCH1-201ENST00000170564 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
GPATCH1-201ENST00000170564 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 TJP1Q07157 1748 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 ALDH1L1O75891 902 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 A1BGP04217 495 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 SUCLG2Q96I99 432 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 NEURL1BA8MQ27 555 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 SRGAP3O43295 1099 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 DOT1LQ8TEK3 1739 aa13.85□□□□□ -0.19
GPATCH1-201ENST00000170564 SDSP20132 328 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 PDE1AP54750 535 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 MTX1Q13505 466 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 ANP32BQ92688 251 aaKnown RBP13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 FSD2A1L4K1 749 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 LRRCC1Q9C099 1032 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 GRM8O00222 908 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 EPHA10Q5JZY3 1008 aa13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
GPATCH1-201ENST00000170564 LRP6O75581 1613 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 TTLL7Q6ZT98 887 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 ANKRD13DQ6ZTN6 518 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 KIF2CQ99661 725 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 METTL22Q9BUU2 404 aaPredicted RBP13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 IL1RAPL2Q9NP60 686 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 RIC3Q7Z5B4 369 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 BCL9O00512 1426 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 GCKRQ14397 625 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 MYD88Q99836 296 aa13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 BICC1Q9H694 974 aaKnown RBP13.83□□□□□ -0.2
GPATCH1-201ENST00000170564 SLIT2O94813 1529 aa13.82□□□□□ -0.2
GPATCH1-201ENST00000170564 ERBB4Q15303 1308 aa13.82□□□□□ -0.2
GPATCH1-201ENST00000170564 SPATA31A1Q5TZJ5 1347 aa13.82□□□□□ -0.2
GPATCH1-201ENST00000170564 C9orf78Q9NZ63 289 aaPredicted RBP13.82□□□□□ -0.2
GPATCH1-201ENST00000170564 PA2G4Q9UQ80 394 aaKnown RBP13.82□□□□□ -0.2
GPATCH1-201ENST00000170564 NWD2Q9ULI1 1742 aa13.82□□□□□ -0.2
GPATCH1-201ENST00000170564 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 SURF6O75683 361 aaKnown RBP13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 DDX58O95786 925 aaKnown RBP13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 TMOD3Q9NYL9 352 aa13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 ATP5J2-PTCD1G3V325 749 aa13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 UNC5CLQ8IV45 518 aa13.81□□□□□ -0.2
GPATCH1-201ENST00000170564 KAT6BQ8WYB5 2073 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 RBM25P49756 843 aaKnown RBP13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 CASP7P55210 303 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 GBP4Q96PP9 640 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 MX1P20591 662 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 GAS2L3Q86XJ1 694 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 NUTM1Q86Y26 1132 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 RHPN1Q8TCX5 695 aa13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 TNPO1Q92973 898 aaKnown RBP13.8□□□□□ -0.2
GPATCH1-201ENST00000170564 KLHDC4Q8TBB5 520 aa13.79□□□□□ -0.2
GPATCH1-201ENST00000170564 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
GPATCH1-201ENST00000170564 CDC45O75419 566 aa13.79□□□□□ -0.2
GPATCH1-201ENST00000170564 KIAA1211Q6ZU35 1233 aa13.79□□□□□ -0.2
GPATCH1-201ENST00000170564 PLBD2Q8NHP8 589 aa13.79□□□□□ -0.2
GPATCH1-201ENST00000170564 MSNP26038 577 aaKnown RBP13.78□□□□□ -0.2
GPATCH1-201ENST00000170564 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
GPATCH1-201ENST00000170564 SPATA31A5Q5VU36 1347 aa13.78□□□□□ -0.2
GPATCH1-201ENST00000170564 SPATA31A7Q8IWB4 1347 aa13.78□□□□□ -0.2
GPATCH1-201ENST00000170564 TOM1O60784 492 aa13.78□□□□□ -0.2
GPATCH1-201ENST00000170564 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
GPATCH1-201ENST00000170564 BCL9LQ86UU0 1499 aa13.77□□□□□ -0.2
GPATCH1-201ENST00000170564 MARCH10Q8NA82 808 aaPredicted RBP13.77□□□□□ -0.21
GPATCH1-201ENST00000170564 IL25Q9H293 177 aa13.77□□□□□ -0.21
GPATCH1-201ENST00000170564 EXOC5O00471 708 aa13.77□□□□□ -0.21
GPATCH1-201ENST00000170564 SASH1O94885 1247 aa13.77□□□□□ -0.21
GPATCH1-201ENST00000170564 FAM13BQ9NYF5 915 aa13.77□□□□□ -0.21
GPATCH1-201ENST00000170564 CD2BP2O95400 341 aaKnown RBP13.76□□□□□ -0.21
GPATCH1-201ENST00000170564 UBE3BQ7Z3V4 1068 aa13.76□□□□□ -0.21
GPATCH1-201ENST00000170564 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
GPATCH1-201ENST00000170564 UBAP1LF5GYI3 381 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms