RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SMC5Q8IY18 1101 aa14.37□□□□□ -0.11
TSPAN9-201ENST00000011898 PDCP20941 246 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 LRRC59Q96AG4 307 aaKnown RBP14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 STRCP1A6NGW2 1772 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 RGPD8O14715 1765 aaPredicted RBP14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 BLMP54132 1417 aaPredicted RBP14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 FLT4P35916 1363 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 CYP46A1Q9Y6A2 500 aa14.36□□□□□ -0.11
TSPAN9-201ENST00000011898 INSRP06213 1382 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 ERC1Q8IUD2 1116 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 C8orf58Q8NAV2 365 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 SIL1Q9H173 461 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 PPP1R1BQ9UD71 204 aaPredicted RBP14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 OVOS2A0A0J9YW53 1432 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 TNS3Q68CZ2 1445 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 OVOS2Q6IE36 1432 aa14.35□□□□□ -0.11
TSPAN9-201ENST00000011898 GCP02774 474 aa14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 SF3B2Q13435 895 aaKnown RBP14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 ZFP91Q96JP5 570 aaPredicted RBP14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 CCDC73Q6ZRK6 1079 aa14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 RBM42Q9BTD8 480 aaKnown RBP14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 MAP3K19Q56UN5 1328 aa14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 VAMP4O75379 141 aa14.34□□□□□ -0.11
TSPAN9-201ENST00000011898 ADAMTS2O95450 1211 aa14.33□□□□□ -0.11
TSPAN9-201ENST00000011898 USP8P40818 1118 aa14.33□□□□□ -0.11
TSPAN9-201ENST00000011898 ZC3H6P61129 1189 aaKnown RBP14.33□□□□□ -0.11
TSPAN9-201ENST00000011898 SPATA31A3Q5VYP0 1347 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 ANKRD26Q9UPS8 1709 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 DHX37Q8IY37 1157 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 PRDM11Q9NQV5 511 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 FAM177BA6PVY3 158 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 HIP1O00291 1037 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 BAG4O95429 457 aaKnown RBP14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 SSH2Q76I76 1423 aa14.33□□□□□ -0.12
TSPAN9-201ENST00000011898 TRDNQ13061 729 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 PLCD4Q9BRC7 762 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 TTC22Q5TAA0 569 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 MRPL50Q8N5N7 158 aaKnown RBP14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 CERKQ8TCT0 537 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 PRIMPOLQ96LW4 560 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 MEIS3Q99687 375 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 PTPRCP08575 1304 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 KIF24Q5T7B8 1368 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 LARP1BQ659C4 914 aaKnown RBP14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 GIMAP7Q8NHV1 300 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 CDK12Q9NYV4 1490 aaPredicted RBP14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 MCM5P33992 734 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 FLIIQ13045 1269 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 SDF4Q9BRK5 362 aa14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
TSPAN9-201ENST00000011898 HSP90AB2PQ58FF8 381 aa14.31□□□□□ -0.12
TSPAN9-201ENST00000011898 TSHZ3Q63HK5 1081 aa14.31□□□□□ -0.12
TSPAN9-201ENST00000011898 AACSQ86V21 672 aa14.31□□□□□ -0.12
TSPAN9-201ENST00000011898 TAF7Q15545 349 aaPredicted RBP14.31□□□□□ -0.12
TSPAN9-201ENST00000011898 WASHC4Q2M389 1173 aa14.31□□□□□ -0.12
TSPAN9-201ENST00000011898 SDSP20132 328 aa14.31□□□□□ -0.12
TSPAN9-201ENST00000011898 RTL1A6NKG5 1358 aa14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 BTBD11A6QL63 1104 aa14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 STK3Q13188 491 aa14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 TMX4Q9H1E5 349 aaPredicted RBP14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 C16orf71Q8IYS4 520 aaPredicted RBP14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 USP25Q9UHP3 1055 aa14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 HOXC9P31274 260 aa14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 IP6K1Q92551 441 aa14.3□□□□□ -0.12
TSPAN9-201ENST00000011898 KRT85P78386 507 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 AXDND1Q5T1B0 1012 aaPredicted RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 SYNE3Q6ZMZ3 975 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 SNX21Q969T3 373 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 C16orf45Q96MC5 204 aaPredicted RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 CEBPZQ03701 1054 aaKnown RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 BLOC1S2Q6QNY1 142 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 RALYLQ86SE5 291 aaKnown RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 PDRG1Q9NUG6 133 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 ZKSCAN5Q9Y2L8 839 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 SOS2Q07890 1332 aaPredicted RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 MYL6BP14649 208 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 KLHL40Q2TBA0 621 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 TMCO3Q6UWJ1 677 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 CABLES1Q8TDN4 633 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 UBXN4Q92575 508 aa14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 ZNF830Q96NB3 372 aaPredicted RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 NOL10Q9BSC4 688 aaKnown RBP14.29□□□□□ -0.12
TSPAN9-201ENST00000011898 GLRX3O76003 335 aaKnown RBP14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 TRIM29Q14134 588 aa14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 EIF4A2Q14240 407 aaKnown RBP14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 TTLL5Q6EMB2 1281 aa14.28□□□□□ -0.12
TSPAN9-201ENST00000011898 USHBP1Q8N6Y0 703 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms