RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TRABD2BA6NFA1 517 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 TGFBR3LH3BV60 316 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 SOAT1P35610 550 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 FRKP42685 505 aaPredicted RBP16.38■□□□□ 0.21
PHGDH-230ENST00000641927 CDKN2CP42773 168 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 ID4P47928 161 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 EMP2P54851 167 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 HBA1P69905 142 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 SERTAD2Q14140 314 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 MAP7Q14244 749 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 RTP5Q14D33 572 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 LTB4RQ15722 352 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 CEBPEQ15744 281 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 FAM69BQ5VUD6 431 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 IGF2-ASQ6U949 168 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 ZNF621Q6ZSS3 439 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 MED25Q71SY5 747 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 DHDDSQ86SQ9 333 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 TMEM151BQ8IW70 566 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 ADCY4Q8NFM4 1077 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 SUN3Q8TAQ9 357 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 METTL21AQ8WXB1 218 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 SCNM1Q9BWG6 230 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.38■□□□□ 0.219e-8■■■□□ 19.1
PHGDH-230ENST00000641927 GID8Q9NWU2 228 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 TAS2R9Q9NYW1 312 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 CROTQ9UKG9 612 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 PADI2Q9Y2J8 665 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 NUP210LQ5VU65 1888 aa16.38■□□□□ 0.21
PHGDH-230ENST00000641927 UNC5CO95185 931 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 RECKO95980 971 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 CD63P08962 238 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 SLC35E2P0CK97 266 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 TNNI3P19429 210 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 EFNA3P52797 238 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 RPS15P62841 145 aaKnown RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 SPDYE7PQ495Y7 208 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 SZRD1Q7Z422 152 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 DPP10Q8N608 796 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 IL22RA1Q8N6P7 574 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 FBXO27Q8NI29 283 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 DOK4Q8TEW6 326 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 MAGED4Q96JG8 741 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 NEUROD4Q9HD90 331 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 PNO1Q9NRX1 252 aaKnown RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 VPS4AQ9UN37 437 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 MAN2B2Q9Y2E5 1009 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 A0A096LPI6 279 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 ATP5HO75947 161 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 DXOO77932 396 aaKnown RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 KRT16P08779 473 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 DLSTP36957 453 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 FOLR3P41439 243 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 STAT5AP42229 794 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 TRPC1P48995 793 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 CDK9P50750 372 aaKnown RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 IGLV3-21P80748 117 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 CAPRIN1Q14444 709 aaKnown RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 MLC1Q15049 377 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 TRMT5Q32P41 509 aaKnown RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 C6orf163Q5TEZ5 329 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 TMEM107Q6UX40 140 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 RINLQ6ZS11 566 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 ST13P4Q8IZP2 240 aaPredicted RBP16.37■□□□□ 0.21
PHGDH-230ENST00000641927 ROPN1LQ96C74 230 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 SLC39A3Q9BRY0 314 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 SEMA3GQ9NS98 782 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 SLC6A13Q9NSD5 602 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 CLDN16Q9Y5I7 305 aa16.37■□□□□ 0.21
PHGDH-230ENST00000641927 IGKV3D-11A0A0A0MRZ8 115 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 A8MUA0 341 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 ALOX12BO75342 701 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 ERN1O75460 977 aaKnown RBP16.36■□□□□ 0.21
PHGDH-230ENST00000641927 ATP1B1P05026 303 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 STT3AP46977 705 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 RASSF2P50749 326 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
PHGDH-230ENST00000641927 SLC25A3Q00325 362 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 BIKQ13323 160 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 SPRED3Q2MJR0 410 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 GTDC1Q4AE62 458 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 LANCL3Q6ZV70 420 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 CLEC4FQ8N1N0 589 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 TRIML2Q8N7C3 387 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 RBM15BQ8NDT2 890 aaKnown RBP16.36■□□□□ 0.21
PHGDH-230ENST00000641927 PLPP5Q8NEB5 264 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 OR2Y1Q8NGV0 311 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 OR5AK3PQ8NH89 298 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 DNAJB8Q8NHS0 232 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 KAT2AQ92830 837 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 RIT1Q92963 219 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 LRRC58Q96CX6 371 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 PELOQ9BRX2 385 aaKnown RBP16.36■□□□□ 0.21
PHGDH-230ENST00000641927 PAIP1Q9H074 479 aaKnown RBP16.36■□□□□ 0.21
PHGDH-230ENST00000641927 CXorf36Q9H7Y0 433 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 ERVK-11Q9UQG0 969 aa16.36■□□□□ 0.21
PHGDH-230ENST00000641927 FARSAQ9Y285 508 aaKnown RBP16.36■□□□□ 0.21
PHGDH-230ENST00000641927 PCDHB14Q9Y5E9 798 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms