RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 OR9A4Q8NGU2 314 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 ZFP28Q8NHY6 868 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 SLC41A2Q96JW4 573 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 C10orf90Q96M02 699 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 AMDHD1Q96NU7 426 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 CSF3RQ99062 836 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 SPRTNQ9H040 489 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-221ENST00000641573 GLIPR2Q9H4G4 154 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 GIMAP4Q9NUV9 329 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 ACSL6Q9UKU0 697 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 PSME2Q9UL46 239 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 ATXN7L1Q9ULK2 861 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-221ENST00000641573 ENTPD4Q9Y227 616 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 SNX8Q9Y5X2 465 aa12.35□□□□□ -0.43
PHGDH-221ENST00000641573 ARID1BQ8NFD5 2236 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 RNF103-CHMP3A0A140T963 221 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 FITM1A5D6W6 292 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 CXCR6O00574 342 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 RDH16O75452 317 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 KRT75O95678 551 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 RPLP0P05388 317 aaKnown RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 C8orf89P0DMQ9 161 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 CKMT1AP12532 417 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 CSNK2A2P19784 350 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 EIF2S3P41091 472 aaKnown RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 CDK9P50750 372 aaKnown RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 DUSP3P51452 185 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 NCBP2P52298 156 aaKnown RBP eCLIP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 POLE2P56282 527 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 SESN3P58005 492 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 HSPB3Q12988 150 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 SPIDRQ14159 915 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 MAP7Q14244 749 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 RGNQ15493 299 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF750Q32MQ0 723 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 INAVAQ3KP66 663 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 SPDYE7PQ495Y7 208 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 GARNL3Q5VVW2 1013 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 CPZQ66K79 652 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 ANGPTL8Q6UXH0 198 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 ZZZ3Q8IYH5 903 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 OR52N2Q8NGI0 321 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 OR5AK3PQ8NH89 298 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 IFI44Q8TCB0 444 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 FIG4Q92562 907 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 CNRIP1Q96F85 164 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 DUS3LQ96G46 650 aaKnown RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 NSMCE2Q96MF7 247 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 LRRN3Q9H3W5 708 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 RAD21L1Q9H4I0 556 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 EPS8L2Q9H6S3 715 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 RPF2Q9H7B2 306 aaKnown RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 NEUROD4Q9HD90 331 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 PRDM9Q9NQV7 894 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 SIRT3Q9NTG7 399 aaPredicted RBP12.34□□□□□ -0.43
PHGDH-221ENST00000641573 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 ZNF780BQ9Y6R6 833 aa12.34□□□□□ -0.43
PHGDH-221ENST00000641573 COL5A1P20908 1838 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 A0A0A6YYC8 382 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 A0A1W2PQM1 296 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 TCRBV5S2A0A599 114 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 TMEM150CB9EJG8 249 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 I3L1I5 382 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 TOX3O15405 576 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 CHST10O43529 356 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 FOXS1O43638 330 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 CPNE6O95741 557 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 NELFEP18615 380 aaKnown RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 SLC7A1P30825 629 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 GPC1P35052 558 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 FEN1P39748 380 aaKnown RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 GRK6P43250 576 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 MVDP53602 400 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 EMP3P54852 163 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 RAB38P57729 211 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 SKP1P63208 163 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 DUSP2Q05923 314 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 FAM53BQ14153 422 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 GRM7Q14831 915 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 CEBPEQ15744 281 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 GPR19Q15760 415 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 ERICH5Q6P6B1 374 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 DHRS13Q6UX07 377 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 ZNF574Q6ZN55 896 aaPredicted RBP12.33□□□□□ -0.44
PHGDH-221ENST00000641573 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 TMPRSS9Q7Z410 1059 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 TMPRSS12Q86WS5 348 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 RNF130Q86XS8 419 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 CCDC116Q8IYX3 515 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 OR4K14Q8NGD5 310 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 PSMA8Q8TAA3 256 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 FAM162AQ96A26 154 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 SLCO4A1Q96BD0 722 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 ZNF681Q96N22 645 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.44
PHGDH-221ENST00000641573 CHST8Q9H2A9 424 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms