RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 TARM1B6A8C7 271 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 INSIG1O15503 277 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 SMAD6O43541 496 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 SPDEFO95238 335 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 FOSL2P15408 326 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 GBX1Q14549 363 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 PAN3Q58A45 887 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 ATXN7L2Q5T6C5 722 aaPredicted RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 TMEM207Q6UWW9 146 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 C2CD4AQ8NCU7 369 aaPredicted RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 OR6K2Q8NGY2 324 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 CRB3Q9BUF7 120 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 EXTL2Q9UBQ6 330 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 LHX3Q9UBR4 397 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 PCDHGA6Q9Y5G7 932 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 LEFTY2O00292 366 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 OR10H3O60404 316 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 LCN1P31025 176 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 MAGEA2P43356 314 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 FGL1Q08830 312 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 HYAL2Q12891 473 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 KIAA0930Q6ICG6 404 aaPredicted RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 LRFN4Q6PJG9 635 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 LAPTM4BQ86VI4 370 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 ZFAND4Q86XD8 727 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 ZSWIM9Q86XI8 627 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 MDGA1Q8NFP4 955 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 MOSPD2Q8NHP6 518 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 SETD6Q8TBK2 473 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 MRPS31Q92665 395 aaKnown RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 ASB2Q96Q27 587 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 SLC6A17Q9H1V8 727 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 LIN7BQ9HAP6 207 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 CHMP1AQ9HD42 196 aaPredicted RBP11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 ENAMQ9NRM1 1142 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
RBFOX1-224ENST00000641259 FAM227AF5H4B4 570 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 NDUFS6O75380 124 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 RAF1P04049 648 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 CPN2P22792 545 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 CD70P32970 193 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SRP9P49458 86 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SLC7A9P82251 487 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ABRAXAS2Q15018 415 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SPHARQ15513 63 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 TEAD2Q15562 447 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ATAT1Q5SQI0 421 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SLC35F1Q5T1Q4 408 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SFRP4Q6FHJ7 346 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 OR8K5Q8NH50 307 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 VOPP1Q96AW1 172 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 MCCC1Q96RQ3 725 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SDHCQ99643 169 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 QRSL1Q9H0R6 528 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SPNS1Q9H2V7 528 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SLC28A3Q9HAS3 691 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 PTGFRNQ9P2B2 879 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 MAFFQ9ULX9 164 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 A0A0B4J293 547 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ARPC5O15511 151 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 CFDP00746 253 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 GSTM5P46439 218 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 HSPA14Q0VDF9 509 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 MEX3DQ86XN8 651 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 CELF5Q8N6W0 485 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SELENOMQ8WWX9 145 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 MYLIPQ8WY64 445 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 RNF31Q96EP0 1072 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 GINS4Q9BRT9 223 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SRRQ9GZT4 340 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 METTL17Q9H7H0 456 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 NIPAL2Q9H841 368 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SLC22A11Q9NSA0 550 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 TRIM77I1YAP6 450 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 CCNDBP1O95273 360 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 PRAMEF12O95522 483 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 CTSOP43234 321 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 STARP49675 285 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ATP4BP51164 291 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ZNF169Q14929 603 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 TEAD4Q15561 434 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 LEXMQ3ZCV2 418 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 PSRC1Q6PGN9 363 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 HTR3DQ70Z44 454 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 VN1R5Q7Z5H4 357 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 PTRH1Q86Y79 214 aaKnown RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 OXR1Q8N573 874 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 MEIOBQ8N635 442 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 UPRTQ96BW1 309 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 KCTD7Q96MP8 289 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ARL6Q9H0F7 186 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 ASAH2Q9NR71 780 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 TAS2R3Q9NYW6 316 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 SLC6A14Q9UN76 642 aa11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
RBFOX1-224ENST00000641259 TEX13CA0A0J9YWL9 993 aa11.28□□□□□ -0.6
RBFOX1-224ENST00000641259 GPR39O43194 453 aa11.28□□□□□ -0.6
RBFOX1-224ENST00000641259 ATG13O75143 517 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms