RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 OR4K14Q8NGD5 310 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 RASSF5Q8WWW0 418 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 GEMIN6Q8WXD5 167 aaKnown RBP16.29■□□□□ 0.2
PHGDH-208ENST00000641023 GABARAPL1Q9H0R8 117 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 FAM60AQ9NP50 221 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 VNN3Q9NY84 501 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 TRPC4Q9UBN4 977 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 PCDHGB3Q9Y5G1 929 aa16.29■□□□□ 0.2
PHGDH-208ENST00000641023 SLC9B1P1A6NJY1 282 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 ADAMDEC1O15204 470 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SDC3O75056 442 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 CLIC3O95833 236 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 CLPTM1O96005 669 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 HMGN2P05204 90 aaKnown RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 XKP51811 444 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 GPR19Q15760 415 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 TTC33Q6PID6 262 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 LRRC25Q8N386 305 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SMYD1Q8NB12 490 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF555Q8NEP9 628 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 OR9A2Q8NGT5 310 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 ELP4Q96EB1 424 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 TCTN2Q96GX1 697 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF607Q96SK3 696 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 TOR3AQ9H497 397 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SERHL2Q9H4I8 314 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 THSD1Q9NS62 852 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 NDUFAF4Q9P032 175 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 MUTYHQ9UIF7 546 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 MRPS2Q9Y399 296 aaKnown RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 NAALAD2Q9Y3Q0 740 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 GALR3O60755 368 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 PIAS2O75928 621 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 OR1E2P47887 323 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 GNA13Q14344 377 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 LASP1Q14847 261 aaKnown RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 C14orf28Q4W4Y0 310 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 CEP68Q76N32 757 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 OR5D16Q8NGK9 328 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 MRPS26Q9BYN8 205 aaKnown RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SOX17Q9H6I2 414 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 CLK4Q9HAZ1 481 aaKnown RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SH3GLB1Q9Y371 365 aa16.28■□□□□ 0.2
PHGDH-208ENST00000641023 SCN3AQ9NY46 2000 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 A0A1W2PS29 197 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 H3BNH8 94 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 SLC28A2O43868 658 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 SERPINB7O75635 380 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 SEC24DO94855 1032 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 C9P02748 559 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 NELFEP18615 380 aaKnown RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 OLR1P78380 273 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 SIM1P81133 766 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 DMWDQ09019 674 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 PRPF38BQ5VTL8 546 aaKnown RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 MCATQ8IVS2 390 aaKnown RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 MAFAQ8NHW3 353 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 COL26A1Q96A83 441 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 ZNF300Q96RE9 604 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 EPYCQ99645 322 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 MAP3K3Q99759 626 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 NPLQ9BXD5 320 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-208ENST00000641023 FAM118AQ9NWS6 357 aa16.27■□□□□ 0.2
PHGDH-208ENST00000641023 SPAG17Q6Q759 2223 aa16.27■□□□□ 0.19
PHGDH-208ENST00000641023 CCDC163A0A0D9SF12 145 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 ZNF860A6NHJ4 632 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 SMIM18P0DKX4 95 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 NR2F1P10589 423 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 RRM2P31350 389 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 PTGER1P34995 402 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 MC3RP41968 323 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 CRISP3P54108 245 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 DUSP7Q16829 419 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 DEFB110Q30KQ9 67 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 RPS26P11Q5JNZ5 115 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-208ENST00000641023 USP53Q70EK8 1073 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 PRSS41Q7RTY9 318 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 OFCC1Q8IZS5 231 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 ZNF786Q8N393 782 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 NUP43Q8NFH3 380 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 MIPOL1Q8TD10 442 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 CSF3RQ99062 836 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 TREX2Q9BQ50 279 aaPredicted RBP16.26■□□□□ 0.19
PHGDH-208ENST00000641023 ANKHQ9HCJ1 492 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 STARD5Q9NSY2 213 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 UCKL1Q9NWZ5 548 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 CLCA2Q9UQC9 943 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 FAM32AQ9Y421 112 aaKnown RBP16.26■□□□□ 0.19
PHGDH-208ENST00000641023 CEP192Q8TEP8 1941 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 RHPN2P1A8MT19 583 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 HCRTR1O43613 425 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 DNAJB6O75190 326 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 MFN2O95140 757 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 TNFRSF1BP20333 461 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 IGFBP5P24593 272 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 KCNC4Q03721 635 aa16.26■□□□□ 0.19
PHGDH-208ENST00000641023 MAPK11Q15759 364 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms