RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PAOXQ6QHF9 649 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 FGD2Q7Z6J4 655 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 SLC22A16Q86VW1 577 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 DOLPP1Q86YN1 238 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 GAL3ST4Q96RP7 486 aa23.31■■□□□ 1.32
VEGFA-232ENST00000640653 FARSBQ9NSD9 589 aaKnown RBP23.31■■□□□ 1.32
VEGFA-232ENST00000640653 PINLYPA6NC86 204 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 E9PLN8 166 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 GSTA1P08263 222 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 ATP5F1P24539 256 aaPredicted RBP23.3■■□□□ 1.32
VEGFA-232ENST00000640653 MAPK12P53778 367 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 RASA2Q15283 850 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 ZNF678Q5SXM1 525 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 ARHGAP11AQ6P4F7 1023 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 FAM47EQ6ZV65 393 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 COMMD6Q7Z4G1 85 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 SLC22A9Q8IVM8 553 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 DND1Q8IYX4 353 aaKnown RBP23.3■■□□□ 1.32
VEGFA-232ENST00000640653 OR4K14Q8NGD5 310 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 OR52N2Q8NGI0 321 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 FAM57AQ8TBR7 257 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 DOK4Q8TEW6 326 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 PHF10Q8WUB8 498 aaKnown RBP23.3■■□□□ 1.32
VEGFA-232ENST00000640653 UCN3Q969E3 161 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 PHF12Q96QT6 1004 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 VKORC1Q9BQB6 163 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 TTTY12Q9BZ98 90 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 PLSCR2Q9NRY7 297 aa23.3■■□□□ 1.32
VEGFA-232ENST00000640653 MYO7BQ6PIF6 2116 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 A0A0G2JMM0 328 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 A0A1W2PPB8 328 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 A0A1W2PRS3 328 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 KIR3DP1A8MWS1 328 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 G3V3Y1 287 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 DLX3O60479 287 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 OR4F21O95013 312 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 TPOP07202 933 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 SLC37A1P57057 533 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 TBL3Q12788 808 aaKnown RBP23.29■■□□□ 1.32
VEGFA-232ENST00000640653 UNC50Q53HI1 259 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 C6orf163Q5TEZ5 329 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 EIF1ADQ8N9N8 165 aaKnown RBP23.29■■□□□ 1.32
VEGFA-232ENST00000640653 SPACA9Q96E40 222 aaPredicted RBP23.29■■□□□ 1.32
VEGFA-232ENST00000640653 TMEM237Q96Q45 408 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 ZNF382Q96SR6 550 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 WWTR1Q9GZV5 400 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 DEFB127Q9H1M4 99 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 CXorf21Q9HAI6 301 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 CHST11Q9NPF2 352 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 ZNF225Q9UK10 706 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 STK38LQ9Y2H1 464 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 UNC79Q9P2D8 2635 aa23.29■■□□□ 1.32
VEGFA-232ENST00000640653 FAM166BA8MTA8 275 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 GOLGA8RI6L899 631 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 NADKO95544 446 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-232ENST00000640653 KRT6AP02538 564 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 KRT6BP04259 564 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 CCL3P10147 92 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 IMPDH1P20839 514 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 HTR1EP28566 365 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 KRT6CP48668 564 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 EBPQ15125 230 aaKnown RBP23.28■■□□□ 1.32
VEGFA-232ENST00000640653 ZNF791Q3KP31 576 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-232ENST00000640653 CD163Q86VB7 1156 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 GALNT12Q8IXK2 581 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 GSPT2Q8IYD1 628 aaKnown RBP23.28■■□□□ 1.32
VEGFA-232ENST00000640653 CDYL2Q8N8U2 506 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 MARVELD3Q96A59 401 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 EPB41L4BQ9H329 900 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 RUBCNLQ9H714 662 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 ZDHHC11Q9H8X9 412 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 IL1RL2Q9HB29 575 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 TBK1Q9UHD2 729 aa23.28■■□□□ 1.32
VEGFA-232ENST00000640653 C1orf226A1L170 272 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 PDE9AO76083 593 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 GLSO94925 669 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-232ENST00000640653 PYGBP11216 843 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 HSD3B1P14060 373 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 HSD3B2P26439 372 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 XKP51811 444 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 GALNT1Q10472 559 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-232ENST00000640653 ZNF630Q2M218 657 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-232ENST00000640653 SLC22A10Q63ZE4 541 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 C3P1Q6ZMU1 363 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 GPRIN3Q6ZVF9 776 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 TAGAPQ8N103 731 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 VPS29Q9UBQ0 182 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 DCDC2Q9UHG0 476 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 PCDHA9Q9Y5H5 950 aa23.27■■□□□ 1.32
VEGFA-232ENST00000640653 MANBAO00462 879 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 CLPSP04118 112 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 FBXO45P0C2W1 286 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 SERPINB3P29508 390 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 HMOX2P30519 316 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 DNASE1L1P49184 302 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 PRKAA2P54646 552 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 CSTF3Q12996 717 aaKnown RBP23.26■■□□□ 1.31
VEGFA-232ENST00000640653 HLA-DQA1Q5Y7H0 255 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 LYPD8Q6UX82 237 aa23.26■■□□□ 1.31
VEGFA-232ENST00000640653 FAM109AQ8N4B1 249 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms