RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 GOLPH3Q9H4A6 298 aa9.95□□□□□ -0.82
PTP4A1-207ENST00000639568 DNAJC11Q9NVH1 559 aa9.95□□□□□ -0.82
PTP4A1-207ENST00000639568 KLHL42Q9P2K6 505 aa9.95□□□□□ -0.82
PTP4A1-207ENST00000639568 PTBP2Q9UKA9 531 aaKnown RBP9.95□□□□□ -0.82
PTP4A1-207ENST00000639568 RAI1Q7Z5J4 1906 aaPredicted RBP9.95□□□□□ -0.82
PTP4A1-207ENST00000639568 IQANK1A0A1B0GTG1 560 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 SYCE3A1L190 88 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 SLC22A20A6NK97 555 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 C4orf51C9J302 202 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 GOLGA8KD6RF30 607 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 GOLGA8TH3BQL2 631 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 CYR61O00622 381 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 ERI3O43414 337 aaKnown RBP9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 HIST1H2AGP0C0S8 130 aaPredicted RBP9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 CD8BP10966 210 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 HIST1H2ADP20671 130 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 FGFBP1Q14512 234 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 FNDC7Q5VTL7 733 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 TIGD3Q6B0B8 471 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 CASC4Q6P4E1 433 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 AAGABQ6PD74 315 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 CYHR1Q6ZMK1 362 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 MBOAT1Q6ZNC8 495 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 PIWIL4Q7Z3Z4 852 aaKnown RBP9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 ANKRD53Q8N9V6 530 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 C7orf57Q8NEG2 295 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 KRT35Q92764 455 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 GAL3ST3Q96A11 431 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 HIST1H2AHQ96KK5 128 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 ADAD1Q96M93 576 aaKnown RBP9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 HIST1H2AJQ99878 128 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 AIF1LQ9BQI0 150 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 TACO1Q9BSH4 297 aaKnown RBP9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 H2AFJQ9BTM1 129 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 G6PC3Q9BUM1 346 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 PARVBQ9HBI1 364 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 RNF112Q9ULX5 631 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 PROCRQ9UNN8 238 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 PDE10AQ9Y233 779 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 DLGAP4Q9Y2H0 992 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 RNF115Q9Y4L5 304 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 MAD1L1Q9Y6D9 718 aa9.94□□□□□ -0.82
PTP4A1-207ENST00000639568 ELOA3DA6NLF2 546 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 SMTNL1A8MU46 457 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 CDC7O00311 574 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 EMC8O43402 210 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 LDB3O75112 727 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 CDH16O75309 829 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 FTCDO95954 541 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 THBS1P07996 1170 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 USF1P22415 310 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 PTPN6P29350 595 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 KIR2DL2P43627 348 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 STARP49675 285 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 TMED10P49755 219 aaKnown RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 PLA2G16P53816 162 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 LIM2P55344 173 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 FBXW4P57775 412 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 LSM11P83369 360 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 ID2Q02363 134 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 PCDH1Q08174 1060 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 IQCB1Q15051 598 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 ELOA3BQ3SY89 546 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 MIDNQ504T8 468 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 PRR31Q5SQ13 230 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 IFNEQ86WN2 208 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 KLHDC8AQ8IYD2 350 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 ELOA3Q8NG57 546 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 OR8K1Q8NGG5 319 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 GIMAP7Q8NHV1 300 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 RAB3IL1Q8TBN0 382 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 SPPL2AQ8TCT8 520 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 SLC5A11Q8WWX8 675 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 CCT6BQ92526 530 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 GCDHQ92947 438 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 NEIL2Q969S2 332 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 RHBDF1Q96CC6 855 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 RBM18Q96H35 190 aaKnown RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 TMEM41AQ96HV5 264 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 TSNARE1Q96NA8 513 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 DGAT2Q96PD7 388 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 CSF3RQ99062 836 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 SPNS1Q9H2V7 528 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 MANSC1Q9H8J5 431 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 COPS7BQ9H9Q2 264 aaPredicted RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 ETNK1Q9HBU6 452 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 EML4Q9HC35 981 aaKnown RBP9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 FANCFQ9NPI8 374 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 TREX1Q9NSU2 369 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 FAIMQ9NVQ4 179 aa9.93□□□□□ -0.82
PTP4A1-207ENST00000639568 CTAGE15A4D2H0 777 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 SLC35F4A4IF30 521 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 GOLGA6L9A6NEM1 432 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 BTNL10A8MVZ5 291 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 CGAP01215 116 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 IGKV3-11P04433 115 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 C8GP07360 202 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 CD3EP07766 207 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 NMBRP28336 390 aa9.92□□□□□ -0.82
PTP4A1-207ENST00000639568 HPDP32754 393 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms