RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 OR7G1Q8NGA0 311 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 OR8K3Q8NH51 312 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF641Q96N77 438 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SPIN2AQ99865 258 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SPIN2BQ9BPZ2 258 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 NANOGQ9H9S0 305 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 NINQ8N4C6 2090 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TEX51A0A1B0GUA7 166 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RNGTTO60942 597 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SEC14L2O76054 403 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 AK1P00568 194 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 FCER2P06734 321 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TIMP2P16035 220 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 P2RX1P51575 399 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LGALS4P56470 323 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RPS24P62847 133 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF763Q0D2J5 394 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM115Q12893 351 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TDGQ13569 410 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TSTQ16762 297 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LRRC25Q8N386 305 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CSNK1A1LQ8N752 337 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF781Q8N8C0 355 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CNOT9Q92600 299 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RSPRY1Q96DX4 576 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 NANSQ9NR45 359 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ROBO3Q96MS0 1386 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 MYH7BA7E2Y1 1941 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 A0A1W2PPM1 405 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LCHNA4D1U4 455 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ANKRD66B4E2M5 251 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ENSAO43768 121 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 DNAJB6O75190 326 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 NIPSNAP2O75323 286 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CLDN7O95471 211 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 TMEM225BP0DP42 221 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 MTHFD2P13995 350 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CPT2P23786 658 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 AGTR1P30556 359 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ADH7P40394 386 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LSSP48449 732 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 STK19P49842 368 aaPredicted RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 RRADP55042 308 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 OGDHQ02218 1023 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 GRM7Q14831 915 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ARHGAP19Q14CB8 494 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 ARL6IP1Q15041 203 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 SERINC5Q86VE9 423 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 CMIPQ8IY22 773 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 L3MBTL4Q8NA19 623 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 GALNT6Q8NCL4 622 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 KIAA1191Q96A73 305 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 METTL2AQ96IZ6 378 aaKnown RBP5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LPAR4Q99677 370 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 LIPT1Q9Y234 373 aa5.33□□□□□ -1.56
SCN1A-209ENST00000635750 A0A0G2JLL6 359 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 UNC119BA6NIH7 251 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CCL22O00626 93 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 KDELR3O43731 214 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF821O75541 412 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ETS2P15036 469 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 IMPDH1P20839 514 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GABRA2P47869 451 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 RPA4Q13156 261 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 PRRT2Q7Z6L0 340 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GALNT12Q8IXK2 581 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ZDHHC14Q8IZN3 488 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 BBS10Q8TAM1 723 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SLC2A12Q8TD20 617 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 STON2Q8WXE9 905 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TSGA13Q96PP4 275 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ATF6BQ99941 703 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 RBM24Q9BX46 236 aaKnown RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 TSPAN10Q9H1Z9 355 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 DPEP3Q9H4B8 488 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CXorf21Q9HAI6 301 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GNB4Q9HAV0 340 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SRRM3A6NNA2 597 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF891A8MT65 544 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GABARAPH6UMI1 98 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 LEFTY2O00292 366 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ECI2O75521 394 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GABARAPO95166 117 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 WDPCPO95876 746 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CDKN2BP42772 138 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CAMLGP49069 296 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 F2RL1P55085 397 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 ZNF616Q08AN1 781 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 GAS6Q14393 721 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 BTBD16Q32M84 506 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 C22orf39Q6P5X5 142 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 MAMDC2Q7Z304 686 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 BPHLQ86WA6 291 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 RNF130Q86XS8 419 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 SKA3Q8IX90 412 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 CMTM8Q8IZV2 173 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 OR51T1Q8NGJ9 327 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 IL31RAQ8NI17 732 aa5.32□□□□□ -1.56
SCN1A-209ENST00000635750 LNX1Q8TBB1 728 aaPredicted RBP5.32□□□□□ -1.56
SCN1A-209ENST00000635750 STK35Q8TDR2 534 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms