RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MAGEL2Q9UJ55 1249 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 CES1P1Q9UKY3 287 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 ZNF462Q96JM2 2506 aa8.96□□□□□ -0.97
PDLIM5-223ENST00000627587 CELSR3Q9NYQ7 3312 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CCDC88CQ9P219 2028 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CFAP46Q8IYW2 2715 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 IGHV1OR21-1A0A087WYE8 117 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 TLCD2A6NGC4 264 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 GLOD5A6NK44 160 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 PGRMC2O15173 223 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 PROM1O43490 865 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 B4GALT2O60909 372 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 AIFM1O95831 613 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 GGT1P19440 569 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CSF2RBP32927 897 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 GPR3P46089 330 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 OR1D5P58170 312 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 VSX2P58304 361 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 ABHD18Q0P651 414 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 MAP7Q14244 749 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 PTOV1Q86YD1 416 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 DNAJC22Q8N4W6 341 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CSNK1A1LQ8N752 337 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 ZCCHC10Q8TBK6 192 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 PNPT1Q8TCS8 783 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CANT1Q8WVQ1 401 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 NCSTNQ92542 709 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 TCTN2Q96GX1 697 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 TGM7Q96PF1 710 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 SERINC2Q96SA4 455 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CD180Q99467 661 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 MAPKAP1Q9BPZ7 522 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 EPS8L2Q9H6S3 715 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 TPT1P8Q9HAU6 139 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 STARD5Q9NSY2 213 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 SIRT3Q9NTG7 399 aaPredicted RBP8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 TAS2R9Q9NYW1 312 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 RIMS3Q9UJD0 308 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 FBXW2Q9UKT8 454 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 CORO2BQ9UQ03 480 aa8.96□□□□□ -0.98
PDLIM5-223ENST00000627587 ELOVL7A1L3X0 281 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 FAM220BPB1ANY3 271 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 NTN3O00634 580 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 TXNDC9O14530 226 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 GSTA4O15217 222 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 DUX1O43812 170 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 WISP1O95388 367 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 ALOX12P18054 663 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 IL1RNP18510 177 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 MANFP55145 182 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 GPLD1P80108 840 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 CLN3Q13286 438 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 RUNX2Q13950 521 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 LY6DQ14210 128 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 DEFB134Q4QY38 66 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 COX20Q5RI15 118 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 PERM1Q5SV97 790 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 GLYATQ6IB77 296 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 KBTBD2Q8IY47 623 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 ADGRG5Q8IZF4 528 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 GOLM1Q8NBJ4 401 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 SUN3Q8TAQ9 357 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 OR5P2Q8WZ92 322 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 EXOSC8Q96B26 276 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 CNRIP1Q96F85 164 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 ZBED6CLQ96FA7 236 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 C10orf90Q96M02 699 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 NSMCE2Q96MF7 247 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 ZNF285Q96NJ3 590 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 CXorf36Q9H7Y0 433 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 NEUROD4Q9HD90 331 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM9Q9P0T7 183 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 UTS2RQ9UKP6 389 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 ACSL6Q9UKU0 697 aa8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 ATXN7L1Q9ULK2 861 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 HEMK1Q9Y5R4 338 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 COL27A1Q8IZC6 1860 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-223ENST00000627587 H3BMH7 237 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 B3GALT2O43825 422 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 SRPX2O60687 465 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 ITGB2P05107 769 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 NUDT7P0C024 238 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 CD1CP29017 333 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 BUD31P41223 144 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 CEBPEQ15744 281 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 CYP51A1Q16850 503 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 PRTGQ2VWP7 1150 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 ZNF750Q32MQ0 723 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 LRRC74BQ6ZQY2 392 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 RAB11FIP2Q7L804 512 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 SERPINA11Q86U17 422 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 PLXDC1Q8IUK5 500 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 MCATQ8IVS2 390 aaKnown RBP8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 ZZZ3Q8IYH5 903 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 MICU2Q8IYU8 434 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 CARFQ8N187 725 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 FAM86B1Q8N7N1 296 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 TMEM102Q8N9M5 508 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 PSMA8Q8TAA3 256 aa8.94□□□□□ -0.98
PDLIM5-223ENST00000627587 REXO5Q96IC2 774 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms