RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TMED5Q9Y3A6 229 aa9.93□□□□□ -0.82
VPS11-208ENST00000621676 TRBC2A0A5B9 178 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 CPSF4LA6NMK7 179 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 SLC22A2O15244 555 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 AFF3P51826 1226 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 DSTNP60981 165 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 HNRNPKP61978 463 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS11-208ENST00000621676 CHRNEQ04844 493 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 MAP4K2Q12851 820 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 GCNT6Q5T4J0 391 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 TMPRSS9Q7Z410 1059 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 TAMM41Q96BW9 452 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 RMND5BQ96G75 393 aaPredicted RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 SH3GL1Q99961 368 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 BDH2Q9BUT1 245 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 NLGN3Q9NZ94 848 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 WNT16Q9UBV4 365 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 MAGEL2Q9UJ55 1249 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 FAM32AQ9Y421 112 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 PCDH17O14917 1159 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 KHNYNO15037 678 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 CHST10O43529 356 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 B3GALT2O43825 422 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 DEAF1O75398 565 aaPredicted RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 OR2B3O76000 313 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 CT62P0C5K7 136 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 NR2F6P10588 404 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 FOLR1P15328 257 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 BNIP2Q12982 314 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 NHSL2Q5HYW2 709 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 OTPQ5XKR4 325 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 NUP43Q8NFH3 380 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 OR7G2Q8NG99 324 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 ADAMTS15Q8TE58 950 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 CDS1Q92903 461 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 CENPNQ96H22 339 aaPredicted RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 RBM18Q96H35 190 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 SH3YL1Q96HL8 342 aaPredicted RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 PYURFQ96I23 114 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 PTCHD1Q96NR3 888 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 IL4I1Q96RQ9 567 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 TOR3AQ9H497 397 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 BRF2Q9HAW0 419 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 SLC2A4RGQ9NR83 387 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 FTSJ1Q9UET6 329 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 OR5K3A6NET4 321 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 H3BN98 237 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 CSF2P04141 144 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 PCSK2P16519 638 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 FUT1P19526 365 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 XCR1P46094 333 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 RPS9P46781 194 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 STXBP1P61764 594 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 HLA-BQ31612 363 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 COMTD1Q86VU5 262 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 DPP10Q8N608 796 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 ZNF321PQ8N8H1 164 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 GPBAR1Q8TDU6 330 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 TSLPQ969D9 159 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 NACC2Q96BF6 587 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 ZBED6CLQ96FA7 236 aaPredicted RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 AMDHD1Q96NU7 426 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 NTN4Q9HB63 628 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 DNAAF2Q9NVR5 837 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 FAM120CQ9NX05 1096 aaKnown RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 C6orf203Q9P0P8 240 aaPredicted RBP9.92□□□□□ -0.82
VPS11-208ENST00000621676 MCM8Q9UJA3 840 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 PCDHB3Q9Y5E6 796 aa9.92□□□□□ -0.82
VPS11-208ENST00000621676 PCNX1Q96RV3 2341 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 TCRBV5S2A0A599 114 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 PRMT3O60678 531 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 UGDHO60701 494 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 CSNK2A2P19784 350 aaPredicted RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 HTR1EP28566 365 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 PIK3CBP42338 1070 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 VASPP50552 380 aaPredicted RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 CRYBA2P53672 197 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 KIAA1024LP59773 190 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 WLSQ5T9L3 541 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 C8orf82Q6P1X6 216 aaPredicted RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 ZFP1Q6P2D0 407 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 R3HCC1LQ7Z5L2 792 aaKnown RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 GRHL3Q8TE85 626 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 TESCQ96BS2 214 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 C8orf44Q96CB5 159 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ADI1Q9BV57 179 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 FAIM2Q9BWQ8 316 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ARRDC1-AS1Q9H2J1 176 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 SERHL2Q9H4I8 314 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 SLC24A3Q9HC58 644 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 SIRT5Q9NXA8 310 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ANGPT4Q9Y264 503 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ATRXP46100 2492 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 PRAMEF27A3QJZ7 478 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 GCM2O75603 506 aaPredicted RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 PIAS2O75928 621 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 H6PDO95479 791 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 RAP2AP10114 183 aa9.91□□□□□ -0.82
VPS11-208ENST00000621676 ARRB1P49407 418 aaPredicted RBP9.91□□□□□ -0.82
VPS11-208ENST00000621676 LIM2P55344 173 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms