RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 EML6Q6ZMW3 1958 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 A0A0G2JMM0 328 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 A0A1W2PPB8 328 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 A0A1W2PRS3 328 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 PINLYPA6NC86 204 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 KIR3DP1A8MWS1 328 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 FAM47E-STBD1D6RA91 191 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 WWP2O00308 870 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 CLDN4O14493 209 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 COPEO14579 308 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 CCDC22O60826 627 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 ENTPD5O75356 428 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 OR6B1O95007 311 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 GUCA1CO95843 209 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 GLI4P10075 376 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 FOSL1P15407 271 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SAT1P21673 171 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SERPINB3P29508 390 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 PPP2R1BP30154 601 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 PEX19P40855 299 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SOX3P41225 446 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 MAGEA5P43359 124 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 CLNS1AP54105 237 aaKnown RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 DLX5P56178 289 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 AP1S2P56377 157 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 ADAM8P78325 824 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 BST1Q10588 318 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 BLMHQ13867 455 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 RBBP5Q15291 538 aaKnown RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 SLC25A35Q3KQZ1 300 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 HSP90AA5PQ58FG0 334 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 XKR6Q5GH73 641 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 NDUFAF5Q5TEU4 345 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 PAQR3Q6TCH7 311 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 RINLQ6ZS11 566 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 TMPRSS11BQ86T26 416 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 TREML1Q86YW5 311 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLK1-215ENST00000621181 FAM109AQ8N4B1 249 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 OR56A3Q8NH54 315 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 RAB3IL1Q8TBN0 382 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SLC5A11Q8WWX8 675 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SREK1Q8WXA9 508 aaKnown RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 ATL1Q8WXF7 558 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 MTBPQ96DY7 904 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 LINGO1Q96FE5 620 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 RSRC1Q96IZ7 334 aaKnown RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 FAR2Q96K12 515 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 FAM173AQ9BQD7 235 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 AIF1LQ9BQI0 150 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 SPNS1Q9H2V7 528 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 MMADHCQ9H3L0 296 aaPredicted RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 EXO5Q9H790 373 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 XAB2Q9HCS7 855 aaKnown RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 RASSF1Q9NS23 344 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 TAS2R1Q9NYW7 299 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 CRIM1Q9NZV1 1036 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 MYOTQ9UBF9 498 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 ZNF223Q9UK11 482 aaPredicted RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 FAM215AQ9Y5M1 114 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 LIPGQ9Y5X9 500 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 CLCA3PQ9Y6N3 262 aa7.25□□□□□ -1.25
CLK1-215ENST00000621181 HRNRQ86YZ3 2850 aaPredicted RBP7.25□□□□□ -1.25
CLK1-215ENST00000621181 A0A0G2JND7 137 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 A0A1B0GTL3 188 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ATP6AP2A0A1C7CYW4 349 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 A6NHS1 94 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 BIRC5O15392 142 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 PROM1O43490 865 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 PRKNO60260 465 aaPredicted RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 SUSD5O60279 629 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 WDR1O75083 606 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ATP6AP2O75787 350 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 IFNA16P05015 189 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 BPGMP07738 259 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 SERPINA6P08185 405 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 MYL2P10916 166 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 MLNP12872 115 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 UQCRC1P31930 480 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ADH7P40394 386 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 MAN2A2P49641 1150 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 RAP1GDS1P52306 607 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 HSD17B7P56937 341 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 IL2P60568 153 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 STXBP1P61764 594 aaKnown RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 BTN3A2P78410 334 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 BMPR2Q13873 1038 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 TOR1AIP1Q5JTV8 583 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 HSDL2Q6YN16 418 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 LIX1LQ8IVB5 337 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 CA13Q8N1Q1 262 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ANKRD53Q8N9V6 530 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 GABPB2Q8TAK5 448 aaPredicted RBP7.24□□□□□ -1.25
CLK1-215ENST00000621181 SARAFQ96BY9 339 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 RASL10BQ96S79 203 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 MECRQ9BV79 373 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 C20orf27Q9GZN8 174 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 NMUR2Q9GZQ4 415 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 KLHL31Q9H511 634 aa7.24□□□□□ -1.25
CLK1-215ENST00000621181 ZNF395Q9H8N7 513 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms