RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 HIST2H3AQ71DI3 136 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 SLC7A6Q92536 515 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 HAS2Q92819 552 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PELOQ9BRX2 385 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 DUSP26Q9BV47 211 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 NXF2Q9GZY0 626 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 GTF2IRD1Q9UHL9 959 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ZC3H13Q5T200 1668 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 EIF1AYO14602 144 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 AP1G1O43747 822 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 IFNGP01579 166 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 BCHEP06276 602 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 SNRPBP14678 240 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 TTPAP49638 278 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RRAS2P62070 204 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 C9orf64Q5T6V5 341 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PDZD3Q86UT5 571 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 RELL1Q8IUW5 271 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PSMG2Q969U7 264 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ARL5BQ96KC2 179 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 SFXN2Q96NB2 322 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 GPR174Q9BXC1 333 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 CRLF2Q9HC73 371 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 ACSS1Q9NUB1 689 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PIGVQ9NUD9 493 aa4.83□□□□□ -1.64
VPS13D-214ENST00000620676 PURGQ9UJV8 347 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 AGO1Q9UL18 857 aaKnown RBP4.83□□□□□ -1.64
VPS13D-214ENST00000620676 J3KTA2 159 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ABCA11PQ4W5N1 156 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PAQR6Q6TCH4 344 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TEX261Q6UWH6 196 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 OR2A12Q8NGT7 310 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TAS2R10Q9NYW0 307 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZIM2Q9NZV7 527 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 U3KQ87 197 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CDC42BPGQ6DT37 1551 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 A0A087WV62 115 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM72CH0Y354 149 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PDYNP01213 254 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ALPPL2P10696 532 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RAB4AP20338 218 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ADRA1BP35368 520 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF484Q5JVG2 852 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM72AQ5TYM5 149 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM72DQ6L9T8 149 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 C1orf94Q6P1W5 598 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RPTNQ6XPR3 784 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM72BQ86X60 149 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TRMT61AQ96FX7 289 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 STK16O75716 305 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 MATN4O95460 622 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CHIT1Q13231 466 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 EIF4HQ15056 248 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF789Q5FWF6 425 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 LCN8Q6JVE9 175 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF248Q8NDW4 579 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 DCLRE1CQ96SD1 692 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TMEM248Q9NWD8 314 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PRAMEF2O60811 474 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RECQL4O94761 1208 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TBX18O95935 607 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 TGFB1P01137 390 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RAB4BP61018 213 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ADARB1P78563 741 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 C1orf220Q5T0J3 134 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF585AQ6P3V2 769 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 JAZF1Q86VZ6 243 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 LACC1Q8IV20 430 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 A0A1B0GVI7 797 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM170BA6NMN3 283 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CAPN5O15484 640 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 MED6O75586 246 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PNPP00491 289 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 H1F0P07305 194 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ACSM4P0C7M7 580 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 CAMLGP49069 296 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 YIF1BQ5BJH7 314 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PRRT3Q5FWE3 981 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZNF852Q6ZMS4 543 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 METTL3Q86U44 580 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZIC5Q96T25 663 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PAPOLGQ9BWT3 736 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 EMC7Q9NPA0 242 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 AHRP35869 848 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PSMB10P40306 273 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 VEGFCP49767 419 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 HIST2H3PS2Q5TEC6 136 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RETSATQ6NUM9 610 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SLC29A4Q7RTT9 530 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 RNF175Q8N4F7 328 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ARL14Q8N4G2 192 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 PNLDC1Q8NA58 520 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 FAM46AQ96IP4 442 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 SLC38A3Q99624 504 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ZCCHC2Q9C0B9 1178 aaKnown RBP4.82□□□□□ -1.64
VPS13D-214ENST00000620676 ATP13A1Q9HD20 1204 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 BTBD17A6NE02 478 aa4.82□□□□□ -1.64
VPS13D-214ENST00000620676 BHLHE40O14503 412 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms