RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FUNDC1Q8IVP5 155 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 KIF2BQ8N4N8 673 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 PPCDCQ96CD2 204 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 SIKE1Q9BRV8 207 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 EPN3Q9H201 632 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 EHD3Q9NZN3 535 aa12.74□□□□□ -0.37
NEK3-210ENST00000620675 C17orf105B2RV13 164 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 IDO1P14902 403 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 PORP16435 677 aaPredicted RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 PRPS1L1P21108 318 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 GSTM5P46439 218 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 STT3AP46977 705 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 ST13P50502 369 aaKnown RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 PGDP52209 483 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 CXADRP78310 365 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 MGAT2Q10469 447 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 FAM174BQ3ZCQ3 159 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 C19orf48Q6RUI8 117 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 RAB43Q86YS6 212 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 ST13P4Q8IZP2 240 aaPredicted RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 NFAM1Q8NET5 270 aaPredicted RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 OR9A2Q8NGT5 310 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 KAT2AQ92830 837 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 IMMP1LQ96LU5 166 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 ZNF700Q9H0M5 742 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 GLIPR2Q9H4G4 154 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 CLMPQ9H6B4 373 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 TAS2R7Q9NYW3 318 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 BLACEA4D250 179 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 MYO1GB0I1T2 1018 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 PRKNO60260 465 aaPredicted RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 DDAH2O95865 285 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 SLC35E2P0CK97 266 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 HPCAL1P37235 193 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 C21orf58P58505 322 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 RPS6KA2Q15349 733 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 CEBPEQ15744 281 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 GSTA3Q16772 222 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 PDCD4Q53EL6 469 aaKnown RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 CPTPQ5TA50 214 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 PIGWQ7Z7B1 504 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 ANKRD46Q86W74 232 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 PARP9Q8IXQ6 854 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 STON2Q8WXE9 905 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 COQ8BQ96D53 544 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 AMDHD1Q96NU7 426 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 DGAT2Q96PD7 388 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 NMUR2Q9GZQ4 415 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 ADAP2Q9NPF8 381 aa12.73□□□□□ -0.37
NEK3-210ENST00000620675 ZNF223Q9UK11 482 aaPredicted RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
NEK3-210ENST00000620675 EXPH5Q8NEV8 1989 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 NSG1A0A0A6YYJ2 146 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 A0A1W2PQ72 361 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 SAGE2PA6NJ88 616 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 PDPK1O15530 556 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 OR10H2O60403 315 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 SCN2BO60939 215 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 SLC22A3O75751 556 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 IGHEP01854 428 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 C1QCP02747 245 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 GPR143P51810 404 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 NCBP2P52298 156 aaKnown RBP eCLIP12.72□□□□□ -0.37
NEK3-210ENST00000620675 PLIN5Q00G26 463 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 VAC14Q08AM6 782 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 DUSP8Q13202 625 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 RAPSNQ13702 412 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 SERTAD2Q14140 314 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 ELAVL1Q15717 326 aaKnown RBP12.72□□□□□ -0.37
NEK3-210ENST00000620675 PRICKLE4Q2TBC4 344 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 TRMT12Q53H54 448 aaKnown RBP12.72□□□□□ -0.37
NEK3-210ENST00000620675 DCAF10Q5QP82 559 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 BROXQ5VW32 411 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 NDUFAF7Q7L592 441 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 CLECL1Q8IZS7 167 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 MIER2Q8N344 545 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 LRRC25Q8N386 305 aaPredicted RBP12.72□□□□□ -0.37
NEK3-210ENST00000620675 VPS33AQ96AX1 596 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 RBM18Q96H35 190 aaKnown RBP12.72□□□□□ -0.37
NEK3-210ENST00000620675 BBS4Q96RK4 519 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 OR8D2Q9GZM6 311 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 CXorf21Q9HAI6 301 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 MAT2BQ9NZL9 334 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 CCDC167Q9P0B6 97 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 ARMCX1Q9P291 453 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 PSME2Q9UL46 239 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 MAN2B2Q9Y2E5 1009 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 ZNF780BQ9Y6R6 833 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 SPTA1P02549 2419 aa12.72□□□□□ -0.37
NEK3-210ENST00000620675 TBX19O60806 448 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 CLPSP04118 112 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 TNNI3P19429 210 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 CSNK2A2P19784 350 aaPredicted RBP12.71□□□□□ -0.37
NEK3-210ENST00000620675 S1PR1P21453 382 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 NT5EP21589 574 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 SSTR4P31391 388 aa12.71□□□□□ -0.37
NEK3-210ENST00000620675 CDK9P50750 372 aaKnown RBP12.71□□□□□ -0.37
NEK3-210ENST00000620675 TMPRSS3P57727 454 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms