RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-223ENST00000618944 OSMP13725 252 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 ELAVL4P26378 380 aaKnown RBP10.61□□□□□ -0.71
TP53-223ENST00000618944 NCBP2P52298 156 aaKnown RBP eCLIP10.61□□□□□ -0.71
TP53-223ENST00000618944 IRF3Q14653 427 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 ARHGAP19Q14CB8 494 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 PLEKHG7Q6ZR37 379 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 HDDC3Q8N4P3 179 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 IQCF1Q8N6M8 205 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 AMER2Q8N7J2 671 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 FAM83FQ8NEG4 500 aaPredicted RBP10.61□□□□□ -0.71
TP53-223ENST00000618944 HTRA1Q92743 480 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 CHFRQ96EP1 664 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 CRELD1Q96HD1 420 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 QRFPRQ96P65 431 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 KCNS3Q9BQ31 491 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 PCDHGA3Q9Y5H0 932 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 PLXND1Q9Y4D7 1925 aa10.61□□□□□ -0.71
TP53-223ENST00000618944 A0A1W2PS29 197 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 EFCAB10A6NFE3 127 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 AGAP5A6NIR3 686 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 KIAA0513O60268 411 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 KCNJ5P48544 419 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 PDGFRLQ15198 375 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 GPR19Q15760 415 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 CARTPTQ16568 116 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 FBXO43Q4G163 708 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 TPRG1LQ5T0D9 272 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 PLAG1Q6DJT9 500 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 ZNF793Q6ZN11 406 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 LSRQ86X29 649 aaPredicted RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 CCDC116Q8IYX3 515 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 CYP4Z2PQ8N1L4 340 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 TCEANCQ8N8B7 351 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 TP53I13Q8NBR0 393 aaPredicted RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 SLC7A13Q8TCU3 470 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 ZNF354BQ96LW1 612 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 ZNF607Q96SK3 696 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 PRR14Q9BWN1 585 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 POLR2J3Q9H1A7 115 aaKnown RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 ANKRA2Q9H9E1 313 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 NEUROD4Q9HD90 331 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 ZCCHC3Q9NUD5 404 aaKnown RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 ZNF232Q9UNY5 417 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 CAB39Q9Y376 341 aaPredicted RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 REV3LO60673 3130 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 LRIT2A6NDA9 550 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 ARHGAP33O14559 1287 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 KAT7O95251 611 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 GJA4P35212 333 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 HSD17B2P37059 387 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 EIF2DP41214 584 aaKnown RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 SOX3P41225 446 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 SOX9P48436 509 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 XKP51811 444 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 UBE3AQ05086 875 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 SLAMF1Q13291 335 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 FGL2Q14314 439 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 IRF4Q15306 451 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 AGBL4Q5VU57 503 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 PGBD2Q6P3X8 592 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 PSRC1Q6PGN9 363 aaPredicted RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 C11orf74Q86VG3 221 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 SLC34A3Q8N130 599 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 ZNF513Q8N8E2 541 aaPredicted RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 OR8K5Q8NH50 307 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 GANCQ8TET4 914 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 CREB3L4Q8TEY5 395 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 RAB7BQ96AH8 199 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 AMDHD1Q96NU7 426 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 CAMK1GQ96NX5 476 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 QRSL1Q9H0R6 528 aaKnown RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 WDR26Q9H7D7 661 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 TVP23BQ9NYZ1 205 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 THAP10Q9P2Z0 257 aaPredicted RBP10.6□□□□□ -0.71
TP53-223ENST00000618944 FBXW2Q9UKT8 454 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 NINQ8N4C6 2090 aa10.6□□□□□ -0.71
TP53-223ENST00000618944 SH3D21A4FU49 640 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 TMEM221A6NGB7 291 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 C4orf51C9J302 202 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 WWP2O00308 870 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 PDE9AO76083 593 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 BCL6P41182 706 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 EIF2B2P49770 351 aaKnown RBP10.59□□□□□ -0.71
TP53-223ENST00000618944 PRDX1Q06830 199 aaKnown RBP10.59□□□□□ -0.71
TP53-223ENST00000618944 SFSWAPQ12872 951 aaKnown RBP10.59□□□□□ -0.71
TP53-223ENST00000618944 CST6Q15828 149 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 PODNL1Q6PEZ8 512 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 LYSMD2Q8IV50 215 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 KIAA1958Q8N8K9 716 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 OR2A1Q8NGT9 310 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 C16orf58Q96GQ5 468 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 SLC35G5Q96KT7 338 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 BBS4Q96RK4 519 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 PSD2Q9BQI7 771 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 CNPPD1Q9BV87 410 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 CDCA4Q9BXL8 241 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 PCBD2Q9H0N5 130 aa10.59□□□□□ -0.71
TP53-223ENST00000618944 DDX31Q9H8H2 851 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms