RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 RAMP1O60894 148 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 NUDT17P0C025 328 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 APEX1P27695 318 aaKnown RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 FOXN2P32314 431 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 TTKP33981 857 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 KLK7P49862 253 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 WASHC5Q12768 1159 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 MSLNQ13421 630 aaPredicted RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 ARHGAP19Q14CB8 494 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 BBS9Q3SYG4 887 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 BICRALQ6AI39 1079 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 CAPN13Q6MZZ7 669 aaPredicted RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 MAP7D3Q8IWC1 876 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 RCOR2Q8IZ40 523 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 PPFIBP2Q8ND30 876 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 MORN4Q8NDC4 146 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 OR9A1PQ8NGU1 263 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 DIO2Q92813 273 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 DAZLQ92904 295 aaKnown RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 FOPNLQ96NB1 174 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 PANX2Q96RD6 677 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 SLC6A7Q99884 636 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 FAM129AQ9BZQ8 928 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 BPESC1Q9GZL8 116 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 DDX28Q9NUL7 540 aaKnown RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 SYBUQ9NX95 663 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 MOCS1Q9NZB8 636 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 KLHL8Q9P2G9 620 aaPredicted RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 PTBP2Q9UKA9 531 aaKnown RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 R3HDM2Q9Y2K5 976 aaKnown RBP9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 NOTCH3Q9UM47 2321 aa9.11□□□□□ -0.95
AP003900.1-202ENST00000616952 MYO1CO00159 1063 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 NDUFS4O43181 175 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 NRDCO43847 1150 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 CEP104O60308 925 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 SNX4O95219 450 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 LHX2P50458 406 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 SETDB1Q15047 1291 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 CARTPTQ16568 116 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 HADHQ16836 314 aaKnown RBP9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 KBTBD12Q3ZCT8 623 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 THEMIS2Q5TEJ8 643 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 NPNTQ6UXI9 565 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 RANBP10Q6VN20 620 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 Q6ZS46 218 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 OR14A16Q8NHC5 309 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 S100PBPQ96BU1 408 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 RHBDF1Q96CC6 855 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 FOXN4Q96NZ1 517 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 RNF157Q96PX1 679 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 SAP130Q9H0E3 1048 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 ACSS1Q9NUB1 689 aaPredicted RBP9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 TMEM184CQ9NVA4 438 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 NLE1Q9NVX2 485 aaPredicted RBP9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 WHRNQ9P202 907 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 SPEF1Q9Y4P9 236 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 SNX8Q9Y5X2 465 aa9.1□□□□□ -0.95
AP003900.1-202ENST00000616952 OR51F1A6NGY5 319 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ZNF839A8K0R7 811 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 IFNA16P05015 189 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ZNF888P0CJ79 500 aaPredicted RBP9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ZNF708P17019 499 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 PSMB1P20618 241 aaKnown RBP9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 HRH2P25021 359 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 SERPINB3P29508 390 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 CHN2P52757 468 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 CLDN18P56856 261 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 LOXL3P58215 753 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 IRF9Q00978 393 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 SRSF4Q08170 494 aaKnown RBP9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 SLC13A2Q13183 592 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 GUSBP1Q15486 140 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ZSWIM7Q19AV6 140 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ANKRD20A4Q4UJ75 823 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ANKRD20A2Q5SQ80 823 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ANKRD20A1Q5TYW2 823 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ANKRD20A3Q5VUR7 823 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 SLC9A4Q6AI14 798 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 CCBE1Q6UXH8 406 aaPredicted RBP9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 GLCCI1Q86VQ1 547 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 TRIM42Q8IWZ5 723 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 KRT222Q8N1A0 295 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 MUC15Q8N387 334 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 SLC15A4Q8N697 577 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 NUBPLQ8TB37 319 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 SLC2A12Q8TD20 617 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 PTPMT1Q8WUK0 201 aaPredicted RBP9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 FIG4Q92562 907 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 CDKN2AIPNLQ96HQ2 116 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 RUNDC3BQ96NL0 473 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 CARD6Q9BX69 1037 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 RNF122Q9H9V4 155 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 CLK4Q9HAZ1 481 aaKnown RBP9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 FANCFQ9NPI8 374 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 RSPH14Q9UHP6 348 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 TRIM33Q9UPN9 1127 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 ZNF148Q9UQR1 794 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 GPR52Q9Y2T5 361 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 FKBP7Q9Y680 259 aa9.09□□□□□ -0.95
AP003900.1-202ENST00000616952 DNAH1Q9P2D7 4330 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms