RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	MCFD2	Q8NI22	146 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CHFR	Q96EP1	664 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LINC00615	Q96LM1	132 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ASB16	Q96NS5	453 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KCNK12	Q9HB15	430 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ENPP4	Q9Y6X5	453 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390		A0A1W2PP55	124 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FFAR1	O14842	300 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLC28A2	O43868	658 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR10H3	O60404	316 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	B4GALT2	O60909	372 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C8orf89	P0DMQ9	161 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR12D1	P0DN82	309 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	BSG	P35613	385 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CCR8	P51685	355 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CD300C	Q08708	224 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	HEPACAM	Q14CZ8	416 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SYPL1	Q16563	259 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF750	Q32MQ0	723 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	VASH1	Q7L8A9	365 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	BCDIN3D	Q7Z5W3	292 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MEX3D	Q86XN8	651 aa	Known RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LINC01555	Q8NAE3	123 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CHPT1	Q8WUD6	406 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLC38A4	Q969I6	547 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	COL21A1	Q96P44	957 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF717	Q9BY31	904 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	AKIP1	Q9NQ31	210 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SCHIP1	Q9P0W5	487 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	C2orf16	Q68DN1	1984 aa		13.18	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ANHX	E9PGG2	379 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RECK	O95980	971 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CDK1	P06493	297 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SOX9	P48436	509 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	BCAP31	P51572	246 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ARMCX4	Q5H9R4	360 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PIP5KL1	Q5T9C9	394 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TUBA3E	Q6PEY2	450 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SMARCD2	Q92925	531 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DACH2	Q96NX9	599 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MS4A8	Q9BY19	250 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KLHL31	Q9H511	634 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	EPS8L2	Q9H6S3	715 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	KMO	O15229	486 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CAPN5	O15484	640 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CA3	P07451	260 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CHM	P24386	653 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CCT3	P49368	545 aa	Known RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PCBP3	P57721	371 aa	Known RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NDUFA5	Q16718	116 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TMEM52B	Q4KMG9	183 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ZNF765	Q7L2R6	523 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DSG4	Q86SJ6	1040 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	HDDC3	Q8N4P3	179 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR6Q1	Q8NGQ2	317 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR5M11	Q96RB7	305 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ANKRA2	Q9H9E1	313 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	FZD3	Q9NPG1	666 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ABCB10	Q9NRK6	738 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	THSD1	Q9NS62	852 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SEC14L3	Q9UDX4	400 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	HCN2	Q9UL51	889 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TRIO	O75962	3097 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TSPAN9	O75954	239 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DNTT	P04053	509 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ADRA2A	P08913	450 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	RHCE	P18577	417 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DRD3	P35462	400 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SSR2	P43308	183 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CDC42	P60953	191 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	PIN1	Q13526	163 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SEC23B	Q15437	767 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ANKRD39	Q53RE8	183 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	COLEC12	Q5KU26	742 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	METRNL	Q641Q3	311 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	GPR32P1	Q8NGA4	272 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MTERF3	Q96E29	417 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	INSM2	Q96T92	566 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	WDR12	Q9GZL7	423 aa	Known RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLIRP	Q9GZT3	109 aa	Known RBP	13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MIR1-1HG	Q9H1L0	117 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SLC6A17	Q9H1V8	727 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LHX9	Q9NQ69	397 aa		13.17	□□□□□ -0.3
CACNA1C-231	ENST00000616390	NDUFS4	O43181	175 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SEMA7A	O75326	666 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	S100A6	P06703	90 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	ADORA3	P0DMS8	318 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CDH3	P22223	829 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	SEPHS1	P49903	392 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	TAS2R38	P59533	333 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	UBE2U	Q5VVX9	321 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	LACC1	Q8IV20	430 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	CADM3	Q8N126	398 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	DEPDC4	Q8N2C3	294 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	OR4D11	Q8NGI4	311 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	MED30	Q96HR3	178 aa		13.16	□□□□□ -0.3
CACNA1C-231	ENST00000616390	COX14	Q96I36	57 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms