RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 MARCH9Q86YJ5 346 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 TCEAL8Q8IYN2 117 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 OR8J1Q8NGP2 316 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 JPH3Q8WXH2 748 aaPredicted RBP13.13□□□□□ -0.31
HPS1-215ENST00000613394 NUS1Q96E22 293 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 NELL2Q99435 816 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 PSD2Q9BQI7 771 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 GABARAPL3Q9BY60 117 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 BRF2Q9HAW0 419 aa13.13□□□□□ -0.31
HPS1-215ENST00000613394 CHD5Q8TDI0 1954 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 TRIM64BA6NI03 449 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 UGDHO60701 494 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 FGBP02675 491 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 SLC2A2P11168 524 aaPredicted RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 IL7P13232 177 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 HNRNPFP52597 415 aaKnown RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 TAP2Q03519 686 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 CDKN3Q16667 212 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 ZNF805Q5CZA5 627 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 LIPIQ6XZB0 460 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 AMZ2Q86W34 360 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 FLCNQ8NFG4 579 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 TXNDC15Q96J42 360 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 IL21Q9HBE4 155 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 RANGRFQ9HD47 186 aaPredicted RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 SPHK2Q9NRA0 654 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 MRPS23Q9Y3D9 190 aaKnown RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 SCN4AP35499 1836 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 MEIOCA2RUB1 952 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 SLCO2B1O94956 709 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 UGT2B10P36537 528 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 DBPQ10586 325 aaPredicted RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 EIF4HQ15056 248 aaKnown RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 SLC35F1Q5T1Q4 408 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 OR51I1Q9H343 314 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 HS3ST2Q9Y278 367 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 ACP5P13686 325 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 ZNF791Q3KP31 576 aaPredicted RBP13.12□□□□□ -0.31
HPS1-215ENST00000613394 ATP6V1C2Q8NEY4 427 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 PLSCR3Q9NRY6 295 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 C1GALT1Q9NS00 363 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 KLHL28Q9NXS3 571 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 NLKQ9UBE8 527 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
HPS1-215ENST00000613394 C2orf92A0A1B0GVN3 265 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 FAM47E-STBD1D6RA91 191 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 CSO75390 466 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 NCR1O76036 304 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 FGF18O76093 207 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 EPHX1P07099 455 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 ARAFP10398 606 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 LAG3P18627 525 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 SLAMF1Q13291 335 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 BAK1Q16611 211 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 LCN1P1Q5VSP4 162 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 SMPDL3AQ92484 453 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 ECHDC3Q96DC8 303 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 FRMD6Q96NE9 622 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 QRFPRQ96P65 431 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 SPATA9Q9BWV2 254 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 DNMT3BQ9UBC3 853 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 STUB1Q9UNE7 303 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 MGAT4BQ9UQ53 548 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 CD8B2A6NJW9 211 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 FAM170BA6NMN3 283 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 ERI3O43414 337 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 LATS1O95835 1130 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 CD8BP10966 210 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 TALDO1P37837 337 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 SEC23BQ15437 767 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 ZNF362Q5T0B9 420 aaPredicted RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 FAM129CQ86XR2 697 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 UFD1Q92890 307 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 EGLN3Q9H6Z9 239 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 GPATCH2Q9NW75 528 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 CCDC59Q9P031 241 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 PPM1DO15297 605 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 MRPS14O60783 128 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 GCM2O75603 506 aaPredicted RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 CXCR2P25025 360 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 XCR1P46094 333 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 LIM2P55344 173 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 PODNL1Q6PEZ8 512 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 HSDL2Q6YN16 418 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 PARS2Q7L3T8 475 aaKnown RBP13.11□□□□□ -0.31
HPS1-215ENST00000613394 SLC39A11Q8N1S5 342 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 CTRCQ99895 268 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 P2RX2Q9UBL9 471 aa13.11□□□□□ -0.31
HPS1-215ENST00000613394 C1orf226A1L170 272 aa13.1□□□□□ -0.31
HPS1-215ENST00000613394 CAPN5O15484 640 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms