RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 DUSP12Q9UNI6 340 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 DSPPQ9NZW4 1301 aa13.95□□□□□ -0.18
CDH1-213ENST00000612417 TCRBV21S2A2A0A5A6 115 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 EFCAB10A6NFE3 127 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 SAGE2PA6NJ88 616 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 DDCP20711 480 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 KELP23276 732 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 RPA4Q13156 261 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 FAM83HQ6ZRV2 1179 aaPredicted RBP13.94□□□□□ -0.18
CDH1-213ENST00000612417 ZNF367Q7RTV3 350 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 SNX29P2Q8IUI4 249 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 DCUN1D3Q8IWE4 304 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 AQP11Q8NBQ7 271 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 HLA-CQ95604 372 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 ZNF764Q96H86 408 aaPredicted RBP13.94□□□□□ -0.18
CDH1-213ENST00000612417 TM7SF3Q9NS93 570 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 UGT2A1Q9Y4X1 527 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 KLK4Q9Y5K2 254 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 AGAP5A6NIR3 686 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 PLPP1O14494 284 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 TBX6O95947 436 aaPredicted RBP13.94□□□□□ -0.18
CDH1-213ENST00000612417 PTHP01270 115 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 NDUFV2P19404 249 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 RGS6P49758 472 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 TDGQ13569 410 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 ARHGAP19Q14CB8 494 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 DUSP7Q16829 419 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 CYP27C1Q4G0S4 372 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 C19orf48Q6RUI8 117 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 KLHL17Q6TDP4 642 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 FAM92BQ6ZTR7 304 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 B3GNT7Q8NFL0 401 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 OR5P2Q8WZ92 322 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 PELI2Q9HAT8 420 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 MS4A12Q9NXJ0 267 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 SLC23A2Q9UGH3 650 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 MOSPD1Q9UJG1 213 aa13.94□□□□□ -0.18
CDH1-213ENST00000612417 CFAP20Q9Y6A4 193 aaKnown RBP13.94□□□□□ -0.18
CDH1-213ENST00000612417 HEATR5BQ9P2D3 2071 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CACNB4O00305 520 aaPredicted RBP13.93□□□□□ -0.18
CDH1-213ENST00000612417 DSCR3O14972 297 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 UPK1BO75841 260 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 SRFP11831 508 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CHMP24386 653 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 GRK5P34947 590 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 TRIM23P36406 574 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 FRKP42685 505 aaPredicted RBP13.93□□□□□ -0.18
CDH1-213ENST00000612417 CRISP1P54107 249 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CDC20Q12834 499 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CCINQ13939 588 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 PUM1Q14671 1186 aaKnown RBP eCLIP13.93□□□□□ -0.18
CDH1-213ENST00000612417 ARMCX4Q5H9R4 360 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 COLEC12Q5KU26 742 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 DEPDC1Q5TB30 811 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 KHDRBS2Q5VWX1 349 aaKnown RBP13.93□□□□□ -0.18
CDH1-213ENST00000612417 FRMPD2BQ6IN97 320 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CEACAM20Q6UY09 585 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 USP30Q70CQ3 517 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 ADGRF3Q8IZF5 1079 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 MMP21Q8N119 569 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CADM3Q8N126 398 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 HMGB4Q8WW32 186 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 GTPBP3Q969Y2 492 aaKnown RBP13.93□□□□□ -0.18
CDH1-213ENST00000612417 FAM131CQ96AQ9 280 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 SP140LQ9H930 580 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 NMNAT1Q9HAN9 279 aaPredicted RBP13.93□□□□□ -0.18
CDH1-213ENST00000612417 NEUROD4Q9HD90 331 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 CD93Q9NPY3 652 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 MMP17Q9ULZ9 603 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 ASF1AQ9Y294 204 aa13.93□□□□□ -0.18
CDH1-213ENST00000612417 FFAR1O14842 300 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 KMOO15229 486 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 CNOT3O75175 753 aaKnown RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 ADAP00813 363 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 GASTP01350 101 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 PIPP12273 146 aaPredicted RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 DDX5P17844 614 aaKnown RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 FUT4P22083 530 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 SERPINB1P30740 379 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 SLC15A1P46059 708 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 PPP2CBP62714 309 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 PPP2CAP67775 309 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 GANABQ14697 944 aaKnown RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 SMAD2Q15796 467 aaKnown RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 ZNF181Q2M3W8 571 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 SLC44A2Q8IWA5 706 aaPredicted RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 SLC38A5Q8WUX1 472 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 IL17FQ96PD4 163 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 CDADC1Q9BWV3 514 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 SORBS1Q9BX66 1292 aaKnown RBP13.92□□□□□ -0.18
CDH1-213ENST00000612417 MS4A8Q9BY19 250 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 SLAMF7Q9NQ25 335 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 WASH6PQ9NQA3 447 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 IFT52Q9Y366 437 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 POU2F1P14859 743 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 TEAD1P28347 426 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 BSGP35613 385 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 IGFALSP35858 605 aa13.92□□□□□ -0.18
CDH1-213ENST00000612417 GSTM5P46439 218 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms